Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03662 ATGTCACTCTCTTTCTCTTCAACCTCTCTGTCATTCTCCGAATCTCCATTCTCACTCCCTAAACTAACACACCAATGTTCAAATTTCCACACAATCACGTATGCATCCAACAATTTTCGTTCCGTAACAAGTGTTGGAGGTTCTACTTTCTGTAGAAGATTTCGTGGTTTCAAACTTTGGATACTTGATACACTCAATTTTCAAATGATGAAGCAACAACCTAACTGTAGAAATCACTTCGAGAATGATATGGAAACTGAAGGATCGGTTTCCGATTCATCTCATGTACCTGATGCTGATAGTAAGGTCACTTCTTTCACGGAGTCTACATCTTTGCTGCAAACAATACCCTTAACCGCGCCCGTGGATGTTAGTAGAGAGCCTTCACTTTGTATTGCTGTCATAGGAGCCACTGGTGAGCTTGCAAGGGGGAAGATTTTTCCAGCTTTATTTGCCCTCTACTATAGTGGCTTTCTTCCTGAGAATGTAGCCATTTTTGGTTATTCAAGAAAGAATATAACTGACGAAGACCTACGCTCCATTATAGCTTCAACATTAACATGCCGAGTTGATCACCAACAGGATTGTGGGGACAAATTAGAAGCTTTCCTTGACAGAACACACTACATTAATGGAGGTTATGACAACAAACATGGGATGTCCTTACTAAAAGTCAGGATGGAGCAGATTGAGGGAAGATCCAAAGCCAACAGGATTTTCTACCTTTCTGTGCCACAAGAAGCACTTTTGGACGTTGCTTCATGTCTTGCAAGCGGTGCTCAGACCCAAAATGGATGGAATCGCATAATAATTGAGAAGCCATTTGGGTTTGACGCTCTCTCTTCCCAAAGGCTGACACAATATCTTCTTTCAAAGTTTGAGGAAAAGCAACTATATAGGATTGATCATCTTCTAGGAAGGAATCTTATTGAAAATCTCACAGTTCTAAGGTTTGCCAATCTAATTTTTGAGCCTCTATGGAGTCGAACTTACATAGACAATGTGCAGGTCATTTTATCAGAGGACTTGGCTGTGCATCCAGGAAGGTATTTCGGTGGCTATGGGATTATCCGGGATATTGTTCACAGCCATATCCTCCAAACAATTGCACTGCTTGCTATGGAACCACCAGTTAGCCTTGATGGAGAAGATATTCGAAATGAAAAGGTCAAGGTTTTAAGATCAATTCGCAAATTGGAGCCTAAGGATGTCATTCTTGGCCAATATAAAGCAAGTAGCAGAGACAAAGTTGATAAGTCCTTAGATGGCCCTACACCTACTTATTTCGCTGCTGCACTATACATTGACAATGCACGTTGGGATGGTGTACCATTTTTGGTTAAAACAGGCCTGGGACTCATCAAACACCAAATGGAGATACGAATTCAATTTCGACCTGTTCCAGGAAATGTTTACCACGACTGCATCGGGCACAATACTGACCGTGCCACAAATGAGCTCATTCTCCGCGATGTTCCTGATGAAGCTATTCTGGTGAGAGTTAACAACAAGGTTCCAGGGTTAGGCTTACAACTGGACTCTTCAGAATTGAATTTGCTTTACAAGGACAAGTACAACGTGGAGGTGCCGGATTCATATGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTGTTTATGAGAAGCGATGAACTGGCAGCTGCGTGGAACATTCTAACTCCAATTATGAGTGAGATAGACAAGAACAATATATCAGTGGAGCTTTATGAGTTGGGCGGTCGCGGTCCAGTCGGGGCATACTACCTCTGGGCAAAACAAGGCGTCCGTTGGGTAGAAGACTAG 1809 0.4245 MSLSFSSTSLSFSESPFSLPKLTHQCSNFHTITYASNNFRSVTSVGGSTFCRRFRGFKLWILDTLNFQMMKQQPNCRNHFENDMETEGSVSDSSHVPDADSKVTSFTESTSLLQTIPLTAPVDVSREPSLCIAVIGATGELARGKIFPALFALYYSGFLPENVAIFGYSRKNITDEDLRSIIASTLTCRVDHQQDCGDKLEAFLDRTHYINGGYDNKHGMSLLKVRMEQIEGRSKANRIFYLSVPQEALLDVASCLASGAQTQNGWNRIIIEKPFGFDALSSQRLTQYLLSKFEEKQLYRIDHLLGRNLIENLTVLRFANLIFEPLWSRTYIDNVQVILSEDLAVHPGRYFGGYGIIRDIVHSHILQTIALLAMEPPVSLDGEDIRNEKVKVLRSIRKLEPKDVILGQYKASSRDKVDKSLDGPTPTYFAAALYIDNARWDGVPFLVKTGLGLIKHQMEIRIQFRPVPGNVYHDCIGHNTDRATNELILRDVPDEAILVRVNNKVPGLGLQLDSSELNLLYKDKYNVEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPIMSEIDKNNISVELYELGGRGPVGAYYLWAKQGVRWVED 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03662 602 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 315 599 IPR022675 GO:0004345|GO:0006006|GO:0050661
Vifa5g03662 602 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 110 599 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 FunFam Glucose-6-phosphate 1-dehydrogenase 301 600 - -
Vifa5g03662 602 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 129 601 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 302 600 - -
Vifa5g03662 602 PRINTS Glucose-6-phosphate dehydrogenase signature 343 360 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 PRINTS Glucose-6-phosphate dehydrogenase signature 268 281 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 PRINTS Glucose-6-phosphate dehydrogenase signature 361 377 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 PRINTS Glucose-6-phosphate dehydrogenase signature 439 465 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 PRINTS Glucose-6-phosphate dehydrogenase signature 292 320 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 134 312 IPR022674 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 Gene3D Dihydrodipicolinate Reductase; domain 2 301 601 - -
Vifa5g03662 602 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 126 315 IPR036291 -
Vifa5g03662 602 MobiDBLite consensus disorder prediction 82 101 - -
Vifa5g03662 602 NCBIfam glucose-6-phosphate dehydrogenase 130 600 IPR001282 GO:0006006|GO:0016614|GO:0050661
Vifa5g03662 602 Gene3D - 126 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03662 Vifa-Chr5 1181095505 1181101158 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03662 K00036 - gmx:100796541 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03662 5 1181095505 1181101158 Vifa5g03662 5 1181095505 1181101158 ECH