Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03653 ATGGCTAATGGAACACCACATGTCCCTTCATTTGGTAGACAAAACAAAATGGTTGTTCGCGTAGTATCTATTATCTTGTGGTCTCATGATGGGAGAAAGGTTAGGTTGACTCAGATTTGTAGAGAGGAAGGTGTTGAACAGGTTTTTGTTTTTGTTGATGCAGCTCATTCCATTGGGTGTACTGGTGTTGACATGCAAGAGATTGGTGCTGATTATTACACTTTGCAAATGGGTTGGCTGTGGAAAGTTCTTGGATTGGGACTAAGGAGTATAGTTCTCAGTTGGTGGTGCCTGATGCCTTGGAATTTTGATTCTGATGCTCTGAAGTTAAGGACACATTTTTGGGATGTTTTTGCAGTTGAAGTTCCTATATACTATAGACCACCTAGAGATGGAGAAGTGGAGCTTGTAACGGGATATGCTCCGATTTCTCATCAAGTTTACAACAAAGTCGAGGATTATTACAAGTTTACGGATGCTGTTAACCAACTCGTGGATAATGGGTTTGCATGTGCTCTTCTTTCCCATTGA 531 0.4105 MANGTPHVPSFGRQNKMVVRVVSIILWSHDGRKVRLTQICREEGVEQVFVFVDAAHSIGCTGVDMQEIGADYYTLQMGWLWKVLGLGLRSIVLSWWCLMPWNFDSDALKLRTHFWDVFAVEVPIYYRPPRDGEVELVTGYAPISHQVYNKVEDYYKFTDAVNQLVDNGFACALLSH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03653 176 SUPERFAMILY PLP-dependent transferases 36 163 IPR015424 -
Vifa5g03653 176 PANTHER L-CYSTEINE DESULFHYDRASE 104 172 - -
Vifa5g03653 176 SUPERFAMILY PLP-dependent transferases 36 78 IPR015424 -
Vifa5g03653 176 Gene3D - 33 86 IPR015421 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03653 K22207 - gmx:100793745 126.716
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03653 5 1179265902 1179266649 Vifa5g03653 5 1179265902 1179266649 ECH