Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03647 ATGCTGCGTCTGAAAGCGTTTCGTCCTTCCACCGATAAAATCGTTAAGATCCAATTGCATCCGACGCATCCATGGATGGTAACTGCCGATGATTCAGATCGAGTTTCTGTTTGGAACTGGGAGCACCGTCAGGTGGTATATGAGTTGAAAGCTGGTGGAGTCGATGAACGACGTTTAGTTGGTGCAAAATTGGAGAAACTAGCTGAGGGAGAAACAGAGTCCAAAGGAAAACCAACAGAAGCCATTCGTGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGCTCTGCAGCAGCAGAGGCACCTACAGCTGTCCATAGTTCAACTTTTAGTTCTCCTGCCCCATCAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTCTGGACTTGGTGACGATGCGTGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTACACTGCATGGAGTTTCTTTATAGATCCGGCGTTGGTGATGGCCCTCTTGTGGCTTTTGGTGCATCTGATGGAGTCATCAGAGTTCTCTCAATGATTACATGGAAGCTTGCGAGAAGATACACTGGAGGTCATAAAGGAACAATCTCTTGCTTGAGGTCTTTCATGGCAGCTTCAGGCGAGGCTCTCCTGGTTTCGGGTGCTAGTGATGGACTGCTCATAATTTGGAGTGCTGATCATGGACAAGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCTCATGATGGCGGGGTTGTGGCAGTTGAGCTGTCCAGAGTGATGGGAGGTGCTCCTCAATTAATTACAATTGGTGCAGATAAGACATTAGCTATATGGGACACAATCTCCTTTAAGGAGCTGCGGCGTATAAAGCCAGTTCCAAGATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACCTATTCTGCTCTCACTAGGCCATTGTGCGAATTGACAACAGTTATTCCTCCACACGCTCTTGCTCCTAATAAGAAACTGAGGGTGTATTGTATGGTTGCCCATACTCTGCAGCCACACCTTGTTGCTATTGGAACCAATATTGGTGTTGTTATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCCCTACCTACCCCACCAGACAGCAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAGCTAAAGCTATTAAATTTTCAACTGAACAACTCTGTAAATCCATCCCTTGGAAATAACAGCGCCTTGTCGGAAACAGGAAGATCTCAGGGAGATTCTTTTGAACCATTGTCTGTCAAGCAAGGGAAGAAGCACATTAGCACACCCGTTCCTCATGATTCATACTCTGTTCTTTCTGTGAGCAGTTCAGGAAAGTATTTAGCAATCGTATGGCCAGATATTCCTTATTTCTCTGTCTACAAAGTCAGTGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTCGCATGGGATACTTGTCGTGACAGATTTGCTATACTGGAATCATCATTACCTCCCCGAATTCCTATAATTCCCAAGGGTAGTTCATCGAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCTGCAGCTGCTGCTGGTTCCTCAGCTTCTGTTCAAGTGCGAATTGTGTTAGATGATGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGGACATCTAGAAGAATCAGTCCTATTGCTGCTACTGCTATTTCGACAATCCAGTCTATGCCGTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCTTTTTCCACTTATGATGATGGATTTTCTTCACATAGATCTCCAGCTGAGGCGGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTTCAGCCTGTGGGAGGTCTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTCGAGTATTGTGCATTTGCTTACCAACAATACATAGTCATATCTTCTTTGCGCCCACAATATAGATACCTGGGAGATGTTTCGATTCCATATGCTACTAGTGCTGTTTGGCACCGGAGGCAACTGTTTGTGGCAACACCAACAACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACACAAATCGACATTGAAACTAAGAAGATGAAAGATGAGCAGAAAATGAGAGAAGCACAGACAAGAGCAATATCAGAGCATGGAGAGTTAGCACTAATTACAGTTGAAGGATCTCAATCTTCTACAGAAGAAAGAATACCATTGAGGCCACCAATGCTGCAGGTGGTTCGACTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTTCTATCGTTACCAAAACAGTCTAGAGTTGATGGTGATGACCCTTGGACAAAAGAAGCAGAGGAGAGAAGGACAAGTGAAGTGGCGGTTGGTGGCGGGGGTGTGTCTGTGGCAGTTACTCGTTTTCCGACGGAGCAGAAACGTCCAGTTGGGCCTCTTGTTGTAGTGGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGCGAGCTCACGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGCTATGCTACTGAAGCACTTCATTTACCTGGATTATCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACATGATGGTACTGGGCTTGGTTTGAATGACATTCTTAATTTAACAGATAAAAAACAAGATGTAACAGATAAAAAACAAGATGTAGTTGAAGGTGTTCAGGGCATAGTAAAATTCGCAAAAGAATTCTTGGAACTTATTGATGCTGCAGATGCTACAGCACAGGGTGAAATTGCCCGTGAAGCTCTGAAGAGGTTAGCTGCCGCTGGATCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGGGGATTAGCATTGCGCCTTGCAAATCACGGAGAGTTGACTCGGCTAAGTGGTCTGATAAACAACCTAATCACGCTCGGCTTGGGACGGGAAGCTGCATTTTCTGCAGCTGTTTTGGGTGACAATGCTCTAATGGAAAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACATGGACGTCCGACTCTGAAGAATTTGGTTCAGGCCTGGAATCAAATTCTACAGAGAGAGGTTGAGCCTACTCCGTCACAAAAAACAGATGCTACAGCTGCATTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCAGATGCAGGGAAGAAACCACCTATCGAAATCCTACCTCCGGGGATGATGTCACTTAATGCTGCCCCTATCTCCATTCAGAAAAAACCAGCTTCTGCTGCTCAGAATGCCCAGCCACAACCAGGCAAGCCTTTGGCACTGGAAGCACCACCTCCTACAACCACAGCAGCGCCGGACAGTTCTGCGCCGCAGCCCGAATCTGAATCTGCACCTGCACCTGCACCTGCATCAGTTAGTGATCCACCTCCTTCAGACTCCATGCCAACTCCTGAGGCTGCTCCACCTGAATCAACTTCTGGAGAAACCACTGTAGATAACGGAGTTCCTGCCCCAACACCAGTGAGTGACGAAAATCCAAATGTTAATGGGGAAACTGTTCAGGCAGAGGCTACAAGCGATCCAGCACCTCCTGAGGCCCCGTCACCAGTAGCAGAGGTTTCTGAGACTAATACTCCAAATCCAACTACAGCACCTGCAAGCGGTGACCCTTTCCTATGA 4014 0.4619 MLRLKAFRPSTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVVYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHSSTFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLARRYTGGHKGTISCLRSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTISFKELRRIKPVPRLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHTLQPHLVAIGTNIGVVICEFDARSLPPVAPLPTPPDSREHSAVFVIERELKLLNFQLNNSVNPSLGNNSALSETGRSQGDSFEPLSVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESSLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRIVLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFSTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQIDIETKKMKDEQKMREAQTRAISEHGELALITVEGSQSSTEERIPLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDGDDPWTKEAEERRTSEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGLSKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGHDGTGLGLNDILNLTDKKQDVTDKKQDVVEGVQGIVKFAKEFLELIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLITLGLGREAAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQILQREVEPTPSQKTDATAAFLASLEEPKLTSLADAGKKPPIEILPPGMMSLNAAPISIQKKPASAAQNAQPQPGKPLALEAPPPTTTAAPDSSAPQPESESAPAPAPASVSDPPPSDSMPTPEAAPPESTSGETTVDNGVPAPTPVSDENPNVNGETVQAEATSDPAPPEAPSPVAEVSETNTPNPTTAPASGDPFL 1337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03647 1337 Gene3D - 904 1159 - -
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 1199 1337 - -
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 1263 1301 - -
Vifa5g03647 1337 Gene3D - 3 348 IPR015943 GO:0005515
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 823 848 - -
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 1316 1330 - -
Vifa5g03647 1337 SUPERFAMILY WD40 repeat-like 6 499 IPR036322 GO:0005515
Vifa5g03647 1337 SMART WD40_4 250 292 IPR001680 GO:0005515
Vifa5g03647 1337 SMART WD40_4 198 241 IPR001680 GO:0005515
Vifa5g03647 1337 SMART WD40_4 1 39 IPR001680 GO:0005515
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 830 845 - -
Vifa5g03647 1337 MobiDBLite consensus disorder prediction 1247 1262 - -
Vifa5g03647 1337 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Vifa5g03647 1337 PANTHER TSET COMPLEX MEMBER TSTF 1 1261 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03647 - - gmx:100777567 2229.91