Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03642 ATGTTGAGGATTGTGAAGGAACCGGAGGAAGTGATGAGAATGCGAGGAGGTGCTCCGAATTATCGTCAGGCGGAGGCTTTGCATGTTCATGGTGTTGCCATTCCCACTGTTGATGGAATTCGGAATGTTCTTAATCACATTGGTGCTCGCGGGAAAGGACAGCAAGTTCTTTGGATTAGTCTTCGTGAAGAACCGCTAATGTATATTAATGGCCGACCTTTTGTATTGCGAGATGTGGAGAGACCATTCTCCAACCTTGAATATACGGGAATTAATAGGGATAGGGTGGAACAAATGGAAGATCGTTTGAAAGAAGACATCATGTTGGAAGCTAGAAGATATGGTAATAAGATCCTTGTGACGGATGAACTGCCTGATGGTCAGATGGTGGACCAATGGGAACCTGTGTCATGTGATTCTGTCGAGACGCCGTTGGAGGTGTATCAGGAATTGCAAAAGGAGGGATACCTTGTTGATTATGAACGTGTGCCTGTAACTGATGAAAAATCGCCTAAGGAACTGGATTTTGATCTTTTGGTACAAAAAATCTCTCAAGCCAAATTAAATACAGAAATAATTTTTAATTGTCAAATGGGGCGTGGACGAACGACAACTGGAATGGTCATTGCAACTTTGGTGTACCTCAATCGAATTGGAGCATTTGGGATTCCAAGAAGCAATTCGATGGGTAGAATTTTTCAATCTATGACCAATGTTGCTGACCATTTGCCAAGCTCAGAGGAGGCAATTTGCAGAGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTATTAGAGGGTGGTGTTGACGGAAAAAACAAGTGGACAAAGTCATTGACAAATGCGCTTCAATGCAGAATCTGCGTGAAGCAATTGGCACCTATCGTAATAGCATTCTGCGACAGCCAGATGAGATGA 918 0.4325 MLRIVKEPEEVMRMRGGAPNYRQAEALHVHGVAIPTVDGIRNVLNHIGARGKGQQVLWISLREEPLMYINGRPFVLRDVERPFSNLEYTGINRDRVEQMEDRLKEDIMLEARRYGNKILVTDELPDGQMVDQWEPVSCDSVETPLEVYQELQKEGYLVDYERVPVTDEKSPKELDFDLLVQKISQAKLNTEIIFNCQMGRGRTTTGMVIATLVYLNRIGAFGIPRSNSMGRIFQSMTNVADHLPSSEEAICRGEYAVIRSLVRVLEGGVDGKNKWTKSLTNALQCRICVKQLAPIVIAFCDSQMR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03642 305 Gene3D Protein tyrosine phosphatase superfamily 3 261 IPR029021 -
Vifa5g03642 305 Pfam Inositol hexakisphosphate 59 213 - -
Vifa5g03642 305 FunFam Paladin isoform A 7 238 - -
Vifa5g03642 305 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 218 IPR029021 -
Vifa5g03642 305 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 162 212 - -
Vifa5g03642 305 SMART PTPlike_phytase_2 59 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03642 Vifa-Chr5 1173839813 1173842189 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03642 - - gmx:100788460 459.529