Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03569 ATGGACGCAAAAGATATCCTTGGATTACCCAAAAACTCGTTCCCGTCTTCAATTGAGAAAAAATCTCGACCTCCCAAAGAGTCTCAGAGAAAACCCGATGGCATTTCTCGCGAGGTTTATGCACTTACTGGTGGCGTGCCACCTCTTATGCCTGCTGTTGATACATCACAATTGAAGAAAAAGCCTCCTCCTCATGAAAAGGTTACTTGGCAGTGGCTTCCTTTCACCAATTCTGCTCGTAAAGATGATCTTAATCTTTACCATTGGGTTCGAATTGTCAATGGTGTTCTACCTACTGGAGACTATTCCTTTGCCAAGTATAACAAGTCTGTTGATATTTTGAAGTACACAGACGAGGAGTATGAAAAGTATTTGACAGATCCTATGTGGACCAAGGAAGAGACAAATGAACTATTCGACTTGTGTGAGAGGTTCGATCTCCGTTTTGTTGTGATAGCTGACAGGTTCACATCATCTCGGACTGTGGAGGAGTTAAAGAGTCGATATCATAGTGTGTCGCGGGCTATATTACTTGCTAGGGCTACATCTTCTGGGGATGTTGCAACACATCCTCTCATAAAGGAACCTTATAATGTTTCACAAGAAATGGAACGAAAACGGGCCCTGTCCATGGTCCTCTCCCAAACAAGACAACAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCAAAAAGAATAGCTGAGTTACGGATGGCTTCGAAGGTTACTGAACAGCCTCAAATGGCTGTTGCTTCAACTGCTGATGCAGGAGTTACAGAGAGGGCTGTCCCTGGTGAGACTATATCACCATCAAATGTGCAACTTCCACCAATGGTTGTTCCTTCGTTGGCAGACAATGCTTCTACTCTAGCTTCTCTTCGTATGCTTCGAGTATATTTGAGGACATATGCACTTGATCAAATGGTGCAAGCTTCAAACTCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTTGGGATCAGTTTGAAACCAAGGGTTCCGACCAAAGCTGTTTGCGCAGAGCATCTTGAACTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCTGAAGGTTCATCTTTCCGCGATGGGTCCTATGGTGAAACACCAGGCACACCAAAGGATCGCACATTTATTCCTGACTCTTTGAATTTTGGAGTTTCAAGCGAAAGGGTTAGCAAAAAGGACCAAAAACGCAAGGCACATGGAGCTCCACCTACAGCGGCCCATAAAAGACCTAGAAAACAAAAGGCTTCGGATCTATAA 1308 0.4365 MDAKDILGLPKNSFPSSIEKKSRPPKESQRKPDGISREVYALTGGVPPLMPAVDTSQLKKKPPPHEKVTWQWLPFTNSARKDDLNLYHWVRIVNGVLPTGDYSFAKYNKSVDILKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFTSSRTVEELKSRYHSVSRAILLARATSSGDVATHPLIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQPQMAVASTADAGVTERAVPGETISPSNVQLPPMVVPSLADNASTLASLRMLRVYLRTYALDQMVQASNSSAGLRTIKRVEQTLQDLGISLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGVSSERVSKKDQKRKAHGAPPTAAHKRPRKQKASDL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03569 435 Pfam SANT/Myb-like domain of DAMP1 102 176 IPR032563 -
Vifa5g03569 435 SMART sant 126 175 IPR001005 -
Vifa5g03569 435 SUPERFAMILY Homeodomain-like 129 172 IPR009057 -
Vifa5g03569 435 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 425 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Vifa5g03569 435 MobiDBLite consensus disorder prediction 20 34 - -
Vifa5g03569 435 MobiDBLite consensus disorder prediction 1 35 - -
Vifa5g03569 435 FunFam DNA methyltransferase 1-associated protein 1 98 185 - -
Vifa5g03569 435 Gene3D - 99 186 - -
Vifa5g03569 435 MobiDBLite consensus disorder prediction 372 435 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03569 K11324 - gmx:100818926 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03569 5 1161765900 1161771607 Vifa5g03569 5 1161765900 1161771607 ECH