Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03544 ATGATGCGGATGCATAAACTCTACCATCGCCTCACTCTCCTCTCTTTATCTTCGCCACTATCTCTCCCTTCCAATCCTTCTCTTCTTCCCCTCCTTCCTCCCTTCACCCCCACTCTCCGTTACAGAACCTCCGCCAACTTCGCCTCTATGTCCACCTCGCGGCTTAGCCATATAACACCTCTCGCTGCTGTGTCCACCGAAGATAGCGCCGCCGGAGCCGTCAACGGCTCCGTTTCTCCCTCCGCCGCAGTCGATACTTTCACTGATTACGAAGATGATTCGACTTTAGGAGTAGGCTATCGTGTTCCTCCACCAGTGATCAGGGACATCGTTGATGCTCCGCCTGTTCCTGCGTTGTCATTTTCACCACATAGAGACAAAATTATTTTTCTTAAACGAAGAGCTTTACCTCCACTGACTGAGTTAGCAAGGCCGGAGGAAAAGTTAGCCGGAATACGCATTGATGGACATTGCAATTCAAGGAGTCGAATGTCATTCTACACCGGTTTAGGGATCCATCAAATTCTTCCTGATGGTACATTAGGACCAGAGGTTGAGGTGCATGGTTTCCCTGAAGGCGCGAAGATAAATTTTGTTAGTTGGTCTCCGGATGCTCGCCATTTGTCATTCAGTGTTCGTGTGAACGAGGAAGATAATAATACTAGTAAGCTCAAAGTATGGATTGCAGATGTGGAAACAGGGAATGCCAGACCTTTGTTTCAGTCTCCTGATGTATATTTGAATGCAGTTTTTGAGAACTATGTTTGGGTAGATAATTCTACATTGTTAGTTTGCACCATTCCATCTACTCGTGCAGCTCCACCGAAGAAACCTCTGGTTCCTGGGGGGCCAAAAATTCAATCTAATGAAATGAAAAGCGTTATTCAAGTAAGAACATATCAGGATTTGCTGAAGGATGAATATGATGAAGATTTGTTTGACTACTATGCAACATCTCAGCTTGTTTTAGCATCTTTGGATGGTACTACAAAGAATTTTGGACCACCAGCTGTTTATACCTCTCTGGACCCTTCCCCAGATGAGAAGTACATTATGATTAATTCACTGCACAGGCCATACTCTTTTATTGCACCTTGTGGAATATTTCCAAAGAAGGTAGAGTTATGGAGTGCTGATGGTAAATTTGTCAGGGAGCTTTGTGATTTGCCGCTTGCCGAAGACATACCAATTACATCCAATAGTGTGCGAAAAGGGATGCGTTCTATTAATTGGAGAGCTGATAAGCCATCAACACTTTACTGGGTAGAAACTCAAGACGGGGGTGATGCAAAAGTGGAAGTTTCTCCTCGTGATATAGTCTACTCACAACCTGCTGAACCACTAGAAGGTGAACCACCGGTGATATTACACAAGCTTGATCTCCGCTATGGAGGAATTTCTTGGTGTGATGATTCGTTAGCTTTTGTATACGAATCTTGGTTTAAAACAAGGCGAATAAGAACATGGGTAATCTCTCCTGGATCTGAAGATGTGGCTCCACGCATCCTATTCGATCGATCTTCAGAAGATGTGTACTCTGACCCTGGCTCTCCCATGTTGCGGAGAACCCAAACTGGGACCTATACTATTGCCAAGATAAAGAAGGGGGGCGATGAAGGAAGATATATCTTACTGAAGGGAAGTGGTGCAACACCAGAAGGGAACATTCCATTCCTTGATCTGTTTGACATACATACAGGTAATAAAGAACGAATCTGGGAGAGTGATAAGGAAAAGTATTTTGAGACTGTTGTTGCTCTAATGTCTGATCAAGAAGAAGGGGATTTACAGTTAGATAGGCTAAAAATACTGATTTCAAAAGAGTCAAAAACAGAGAACACCCAATATTACTTTGTTAGCTGGCCAGATGCAAAAAGAGTTAAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCATTGCAGAAAGAGATGATCAGGTATCAAAGGAAAGATGGGGTTCAGCTTACTGCTACATTATACTTGCCACCTGGTTACAATCCATCAACAGACGGTCCTTTGCCATGTTTAGTTTGGTCTTACCCTGGAGAATTTAAGAGCAAAGATGCTGCTAGCCAAGTTCGTGGTTCTCCAAATGAGTTTGCTGGGATCGGTTCCACATCACCCCTTCTTTGGCTGGCTCAAAGATTTGCAATTCTATCTGGGCCCACCATTCCTATCATCGGTGAGGGTAAAGAAGAGGCAAACGATAGCTATGTAGAGCAATTAGTTGCAAGTGCAGAGGCCGCTGTGGAAGAAGTTATTCGGCGTGGGGTAGCTCATCCAAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCGTTCATGACTGCAAACCTCCTAGCACACGCCCCTCATCTCTTTTGTTGTGGAATTGCTCGTTCTGGTGCTTACAATAGAACACTTACTCCTTTTGGTTTTCAGAATGAAGATAGAACTCTTTGGGAGGCCACTAATACCTATGTCGAGATGAGTCCCTTCATGTCTGCTAATAAAATTAAGAAGCCTATCTTGCTTATCCATGGGGAAGAGGATAATAATCCAGGAACATTAACCATGCAGTCAGACAGGTTTTTCAGCGCTCTGAAGGGTCATGGTGCTCTTTGTCGGCTGGTGATTCTGCCTTATGAAAGCCATGGTTATTCTTCCAGAGAAAGCATCATGCATGTCCTTTGGGAAACAGTGGAGGTGGCAGCAAAGAAGAATGTGATCTCGAGCATGAAGAATCTCATTCTCTGCCAAGATCTTCCTTGTGAAAAATCCGCCAATATTCTGGGGAGCACTAGAATTGAAGCATCCAAATGA 2808 0.4405 MMRMHKLYHRLTLLSLSSPLSLPSNPSLLPLLPPFTPTLRYRTSANFASMSTSRLSHITPLAAVSTEDSAAGAVNGSVSPSAAVDTFTDYEDDSTLGVGYRVPPPVIRDIVDAPPVPALSFSPHRDKIIFLKRRALPPLTELARPEEKLAGIRIDGHCNSRSRMSFYTGLGIHQILPDGTLGPEVEVHGFPEGAKINFVSWSPDARHLSFSVRVNEEDNNTSKLKVWIADVETGNARPLFQSPDVYLNAVFENYVWVDNSTLLVCTIPSTRAAPPKKPLVPGGPKIQSNEMKSVIQVRTYQDLLKDEYDEDLFDYYATSQLVLASLDGTTKNFGPPAVYTSLDPSPDEKYIMINSLHRPYSFIAPCGIFPKKVELWSADGKFVRELCDLPLAEDIPITSNSVRKGMRSINWRADKPSTLYWVETQDGGDAKVEVSPRDIVYSQPAEPLEGEPPVILHKLDLRYGGISWCDDSLAFVYESWFKTRRIRTWVISPGSEDVAPRILFDRSSEDVYSDPGSPMLRRTQTGTYTIAKIKKGGDEGRYILLKGSGATPEGNIPFLDLFDIHTGNKERIWESDKEKYFETVVALMSDQEEGDLQLDRLKILISKESKTENTQYYFVSWPDAKRVKVTNFPHPYPQLASLQKEMIRYQRKDGVQLTATLYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAASQVRGSPNEFAGIGSTSPLLWLAQRFAILSGPTIPIIGEGKEEANDSYVEQLVASAEAAVEEVIRRGVAHPKKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATNTYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQSDRFFSALKGHGALCRLVILPYESHGYSSRESIMHVLWETVEVAAKKNVISSMKNLILCQDLPCEKSANILGSTRIEASK 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03544 935 FunFam probable glutamyl endopeptidase, chloroplastic 636 903 - -
Vifa5g03544 935 SUPERFAMILY alpha/beta-Hydrolases 644 895 IPR029058 -
Vifa5g03544 935 Gene3D alpha/beta hydrolase 636 900 IPR029058 -
Vifa5g03544 935 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 92 896 - -
Vifa5g03544 935 SUPERFAMILY DPP6 N-terminal domain-like 192 575 - -
Vifa5g03544 935 Pfam Prolyl oligopeptidase family 750 891 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03544 Vifa-Chr5 1155998771 1156004659 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03544 - - aprc:113863823 1527.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03544 5 1155998771 1156004659 Vifa5g03544 5 1155998771 1156004659 ECH