Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03510 ATGGAAAAAATCTTCTCGGTTTTGGTTATCTGCGTGATTGTATTTTCTCACCAAACCTCCGCAGAGGAAATCAAAGGCAAAGCTTTAATCCAAAGTGTATGCAATTTATCACCAAACAACAAGGATCTCTGCGTGCAAGTTCTTTCTTCCGACCCATCAAAATCACCAAACGCCGATCTTACAGACCTAGCAATAGTAGCCCTAAGAGTTGCTGCTAAAAACGCTTCTGCAATTCTAACCGACGTGAAGATGTTGATCGACGATGCTGATCTTGACCCTGAAATCCAACAAGGTTTGGCAGATTGTAAACAAACAATCTTGGACGCTGAATCTCAGCTTGAAGACACCATTGCTGCATTGTTGGTTGAAGCCGATGTTGATGCTCAAACATGGTTGAAGGCTGCTTTGGCTGCTATTACAACTTGCGATGATTCTATTCCTGGCAATGATGATGTTTTGTCTGTCAAGAGTCAGATGTTCCGCAAATTATGCAACATTGTTGTTGTTATTACCAAGGCCGTGCCTGCTTCACTTCACGCATAA 543 0.4236 MEKIFSVLVICVIVFSHQTSAEEIKGKALIQSVCNLSPNNKDLCVQVLSSDPSKSPNADLTDLAIVALRVAAKNASAILTDVKMLIDDADLDPEIQQGLADCKQTILDAESQLEDTIAALLVEADVDAQTWLKAALAAITTCDDSIPGNDDVLSVKSQMFRKLCNIVVVITKAVPASLHA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03510 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 174 IPR035513 -
Vifa5g03510 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 173 IPR035513 -
Vifa5g03510 180 SMART PMEI_2 25 170 IPR006501 GO:0004857
Vifa5g03510 180 NCBIfam pectinesterase inhibitor domain 4 172 IPR006501 GO:0004857
Vifa5g03510 180 Pfam Plant invertase/pectin methylesterase inhibitor 29 167 IPR006501 GO:0004857
Vifa5g03510 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03510 Vifa-Chr5 1148492133 1148492675 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03510 - - gmx:102667060 241.506