Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03500 ATGGCCGACAAGAAGCGGAAGGAGAGGGCCGACGCCAAACGCAGCAGCCGCAACACTGTCACCAAGAAATCAAAGAAGACTTCCGACATTCGCCGGAAAAAAACCGGTCCCCATTTGCCTTCATCTCTGAAAAAACAGATCGAAAGCTTAAACCCTACCACCGTTGAAATCGATGAAGTCGACACTGACGTATACGAATACGAAGAAGAATTACCTGAAGAAGAATCAAAGAAGAACAAGCGTTACGACCCTGTCGCCGTCAAAGATAATGATGATCTTTCTTCTGATTTCGAGGATGAGAACGTGCAATCTGATGATGAAGATGTAGATGATGAAGATTCCGGAGACGAAGATGGCGCGAGACATGCTAGGTTGTTACAAGAAATTACTGGGAAGACTATGATCAAGGATACTGTTATTCCTGAGCTATATCCAGATTCTGAAGATAATGATAATCCCAGTCGTGATGTTGTGGATGGTGATGGTGATGGTGATGGACGTGTTAGTATTAACGACCTCCTTGAGCCTCTCCGTGAAAAGCCTGAATTTGCAAATGATTATGCAAAACTTCGTTTGAGAAATCAAGTTATCGAGAAGCATGCTAGAACTGTTTACGCACCACTTCCGAAGGCGGAACAAGCGAAGGTAGAAAGGAAGGTAGCGTATGAAATATCGAAGAAAGAAGTGACGAAGTGGCAGCCTATTATTAAGAGGAATAGAGAGGCTCCTACTATATTCTTTGATGAAAAAACAGATCTAGGGTTTTCAACTATAGGAGCAATAGCTTCTGAGTTTGAACCCAGAACTGAACTCGAGAGGAAAATGGCTGCCCTAGTTCAGAATGATAAAATTTTGGAAGCTCATAAAAACGATGGTTTTCGGCTTCTTGAATTAAACAAGGTTTCTATTGAAGATGAGAAGGAACGACAAAACCGGAATGCTAAAATGCGGAGCCTTCTTTTTCGTAATGAACTAAGGGCAAAGCATGTTAAAAAGATAAAGTCCAAGACATATCATCGTTTGTTAAAGAAAGATAGACTGAAGGCAGAATCTTCTCAACCTCAAATGGATCCTGAAGCTGCTAAGGAATATGCCATGAAACAAGAACGCCAGAGGGCTGAGGAACGCATGACTTTGAGACACAAACATAAAAGTCCGTGGCTTCAGCGTAACATGCAACGCGGTTTAGATAAGCAGGATGAAGGAACTCGTGCTGCTGTGACTGAGCATTTTCAAAGACACGAGGAACTGACTAGAAAAATGAATACTATGGACAGTAGCAGTAGCAGCAGTGACGATTCCAGTTATGAAGATGATGATGAGGATGCTGCTGATTCGGATTCAGACAAGGCTAACAAGATTTTGCAAAAAGCTAAACAAAAAACACTAGAAGTGTTGGAGGAAGATGAAGAAATTCCCAAGTCGGGATTACTATCTTTACCTTTTATGAGGCGTGGATTGGAGAAAAGAAAAGAAGAAACTATGGAAGAAGTCAACCTTACTGTACAAGAATACGAAGATTCCATGAAGAAGCTGGAGGGTTCCGATGGCTCAGAAGATCCAAAAGTAGCATCTACCAGTGGCAGAAGAGTATTTGGAATGGCTAAAAAAGCACAGATAGTTGATGCTGGTAATAAAGTGAAATCAGATAAATTTTATGATAACAGTGATAGTGATGATGACTTGGAGGCCAATAGAAGTGGCAACATTGAGAATCAGGAAAGTGATCTTCCGCAGAACGATATCATTGATGATTTAGTCTTGAATCAAAAAGGTTTTGATACTCACAAAGAATCTGTTTTCAAGAACTTTGACGAGATTGTAAAAAATCCTGGGCCAAAAACCACATATGAAGTTTCCATATTTTCCTCAGATAAATGGAATAAGGCAAAAAACAAAAATGATATAGACACAAACGTCAAGAAGTCTCCGAAGTTGAAAAAACCTGCTAGGCCCAATGTAAAGAACACTGAAAACGATCAACTGTCAGAGGACAGCGATACAGATAATGAAGGACAGATGGTGGATGGAATTTTGACTTCTGCATCTAAACTATCTTATGAACTTCCATCTCAAGAGGAGCTCATTCGACAAGCTTTTGCTGGGGATGATGTAGAAGATGCTTTTGAAAAGGATAAACAGGAGGTCCTCAATGAAGAAAATCCAGAGCCAGAAAAACCTCTAATTCTTCCTGGCTGGGGCCAATGGTCTTATGTACAAGAAAAGAAAGGTTTACCATCCTGGGTGATCAAAAAACAGGAAGATGCCCGGAGAAAAAAGGAAGACGCTATCAAGAGGAGAAAGGATGCTCAGCTAAAAAATGTGATCATCTCTGAGAAATTAAGCAAGAAGGCTGAGAAACTCCATACAAAAATGTTGCCTTATCCCTTCACTTCCAAAGAGGTCTATGAACAGAGTATGCGCATGCCCATTGGACCTGAATTTAACCCAGCAACTACTATTGGACTTCTTAATCGGCCCGCAGTGGTGAAGAAGCCAGGTGTTATCATAAAACCTATAGAATTTGAAGAAGTGAATCCTCATGATAAGTCAGAGCAAGGGTTCGTTGAGAATAAGTTGAAGAGAACCAAAGGAAATTCTAGCAAAGCCAAGTTGAAGAGAACCAAAGGAAATTCTAGCAAAGCCAAGTTGAAGAGGAGCAAAGGAAATTCTAGCAAAGCCAAGTTGAAGAGAAGCAAAGGAAATTCTAGCAAAGCCATGAAAAAGTCGAAGAATTAG 2739 0.4067 MADKKRKERADAKRSSRNTVTKKSKKTSDIRRKKTGPHLPSSLKKQIESLNPTTVEIDEVDTDVYEYEEELPEEESKKNKRYDPVAVKDNDDLSSDFEDENVQSDDEDVDDEDSGDEDGARHARLLQEITGKTMIKDTVIPELYPDSEDNDNPSRDVVDGDGDGDGRVSINDLLEPLREKPEFANDYAKLRLRNQVIEKHARTVYAPLPKAEQAKVERKVAYEISKKEVTKWQPIIKRNREAPTIFFDEKTDLGFSTIGAIASEFEPRTELERKMAALVQNDKILEAHKNDGFRLLELNKVSIEDEKERQNRNAKMRSLLFRNELRAKHVKKIKSKTYHRLLKKDRLKAESSQPQMDPEAAKEYAMKQERQRAEERMTLRHKHKSPWLQRNMQRGLDKQDEGTRAAVTEHFQRHEELTRKMNTMDSSSSSSDDSSYEDDDEDAADSDSDKANKILQKAKQKTLEVLEEDEEIPKSGLLSLPFMRRGLEKRKEETMEEVNLTVQEYEDSMKKLEGSDGSEDPKVASTSGRRVFGMAKKAQIVDAGNKVKSDKFYDNSDSDDDLEANRSGNIENQESDLPQNDIIDDLVLNQKGFDTHKESVFKNFDEIVKNPGPKTTYEVSIFSSDKWNKAKNKNDIDTNVKKSPKLKKPARPNVKNTENDQLSEDSDTDNEGQMVDGILTSASKLSYELPSQEELIRQAFAGDDVEDAFEKDKQEVLNEENPEPEKPLILPGWGQWSYVQEKKGLPSWVIKKQEDARRKKEDAIKRRKDAQLKNVIISEKLSKKAEKLHTKMLPYPFTSKEVYEQSMRMPIGPEFNPATTIGLLNRPAVVKKPGVIIKPIEFEEVNPHDKSEQGFVENKLKRTKGNSSKAKLKRTKGNSSKAKLKRSKGNSSKAKLKRSKGNSSKAMKKSKN 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03500 912 Pfam Utp14 protein 153 842 - -
Vifa5g03500 912 Coils Coil 753 773 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 362 382 - -
Vifa5g03500 912 Coils Coil 484 515 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 148 166 - -
Vifa5g03500 912 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 2 852 IPR006709 GO:0006364|GO:0032040
Vifa5g03500 912 MobiDBLite consensus disorder prediction 847 864 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 42 56 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 71 92 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 847 912 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 394 421 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 1 166 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 547 581 - -
Vifa5g03500 912 Coils Coil 293 313 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 547 567 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 631 673 - -
Vifa5g03500 912 ProSitePatterns EF-hand calcium-binding domain. 161 173 IPR018247 -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 1 25 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 865 912 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 93 115 - -
Vifa5g03500 912 MobiDBLite consensus disorder prediction 344 455 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03500 K14567 - gmx:100784007 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03500 5 1147608214 1147613757 Vifa5g03500 5 1147608214 1147613757 ECH