Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03497 ATGTTGTCGGAATTAGCCGACGACATAATTCTCAACATACTATGGAAGGTTGAAGAAGACCCTCGCGACTGGGCTCGTCTCTCTTGCGTCTCTTCAAAGCTCAACTCTCTCATCCACGCTTTCTGCTGGAAGAACAAAACCTCACTCACCATCCCTTCAGAGCTTCTCTCTTGTTCATCACAAGAACACTCTCTTCATAAACTCTCTTTCTGTTGTCCCGGTCCTCTTCACGCCGGTATCCTCTTCAACAACACGGCTGATTTCCCCGACGAACACCACCACCAACCCACCACCACCACCACGGCAACAGTGCCAATACCGACAACATCTTCGTCTTCTCGACCTAATGAACCTAATGAATGTTCTTCCATTTGGTCACTTTACGACGATCTTTATCATGATACCCTCTATGCAGATTCTGAATTCCATCAAGAAGAACCTACCCATGAAGAGATTCGAGCTGGAGTTGTTGATGTTCCGGTTGAATCTAAGAAAAGAAAGGTTACTGGTTCATTGAGTTCGCACTTGGCGACAGGAAAATGGACGCTGAGTAGAGAACAAGGGAGTAAGCTACTTGGGAGACAGTACCGTGATGATTGTTTATATGTTTGTGATTGGCCTGGTTGTGTTCATTTGGAGGAGAAGAGAAAGTATAGGCTTTTCAGAGGGGTGTTTATGAATTTCAAGAGGACGCGTGTTTGGAAGACGGTGAATGATTGTAGTAACAGGAAGAAGATTGATTTGCCTTGTGCTTTTTGTTCTTGTAATCATACTTGGGATCTTTATTCTGCGTTTTGTTTGAAGAGAGGGTTTGGCTTTCATGATGATGGGGAGCCTGTTGTTAGGGCTTATGTTTGTGATAATGGTCATGTTTCTGGTGCTTGGACTGATGTTCCCATCTACTCTTGA 909 0.4444 MLSELADDIILNILWKVEEDPRDWARLSCVSSKLNSLIHAFCWKNKTSLTIPSELLSCSSQEHSLHKLSFCCPGPLHAGILFNNTADFPDEHHHQPTTTTTATVPIPTTSSSSRPNEPNECSSIWSLYDDLYHDTLYADSEFHQEEPTHEEIRAGVVDVPVESKKRKVTGSLSSHLATGKWTLSREQGSKLLGRQYRDDCLYVCDWPGCVHLEEKRKYRLFRGVFMNFKRTRVWKTVNDCSNRKKIDLPCAFCSCNHTWDLYSAFCLKRGFGFHDDGEPVVRAYVCDNGHVSGAWTDVPIYS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03497 302 MobiDBLite consensus disorder prediction 95 119 - -
Vifa5g03497 302 SUPERFAMILY F-box domain 1 74 IPR036047 GO:0005515
Vifa5g03497 302 MobiDBLite consensus disorder prediction 91 119 - -
Vifa5g03497 302 CDD F-box_SF 3 39 - -
Vifa5g03497 302 PANTHER EID1-LIKE F-BOX PROTEIN 2-RELATED 3 301 IPR040267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03497 Vifa-Chr5 1145847591 1145848499 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03497 - - mtr:11435282 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03497 5 1145847591 1145848499 Vifa5g03497 5 1145847591 1145848499 ECH