Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03496 ATGGCTGAAACTCAGGAGAAGCAAGTGATGGTGGTTGGCATCGACGACAGTGATTATAGTACCTATGCTCTTGAATGGACTTTGGATCATTTGTTTACAACAGTGTCGAATCCAATCTTCAAACTTGTTCTTGTTTATGCCAAACCTTCTGTTAGTGCTAGTGTTGGATTCGTTGGACCTGGAGCTGCTGAGGTGTTGCCTGTTGTGGATGCCGATTTGAAAAGAACTGCTGTGTTGGTTATTGAAAGAGCTAAGGAAATCTGCACCAAGAGATCGATAAAAGACATAGTTGTGGAAACGGTTGAAGGTGATCCTAGAAATGTTCTTTGTGATGCTGTGGAAAAGCATCATGCTTCAACATTGGTTGTTGGTAGCCATGGTTATGGAGCTATAAAAAGGGCGGTTTTAGGCAGTGTAAGTGACTACTGTGCTCATCATGCTCATTGCACTGTGATGATTGTGAAGAAGCCAAAAACCAAACATTGA 486 0.4218 MAETQEKQVMVVGIDDSDYSTYALEWTLDHLFTTVSNPIFKLVLVYAKPSVSASVGFVGPGAAEVLPVVDADLKRTAVLVIERAKEICTKRSIKDIVVETVEGDPRNVLCDAVEKHHASTLVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03496 161 CDD USP_Like 10 154 - -
Vifa5g03496 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 157 - -
Vifa5g03496 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 161 - -
Vifa5g03496 161 Pfam Universal stress protein family 9 155 IPR006016 -
Vifa5g03496 161 PRINTS Universal stress protein signature 7 25 IPR006015 -
Vifa5g03496 161 PRINTS Universal stress protein signature 115 127 IPR006015 -
Vifa5g03496 161 PRINTS Universal stress protein signature 133 155 IPR006015 -
Vifa5g03496 161 Gene3D HUPs 1 161 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03496 Vifa-Chr5 1145845814 1145846576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03496 - - adu:107492483 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03496 5 1145845814 1145846576 Vifa5g03496 5 1145845814 1145846576 ECH