Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03493 ATGAGTCGTCATCCAGAGGTTAAGTGGGCTCAGAGAGTAGACAAGGTCTACATCACAGTGCAATTGGCTGATTCCAAAGATGCTAAAGTTGATCTTACCCCTGAGGGTGAGTTTATCTTTTCTGGTAGTGCTGGGGCTGGAGACAATAAGTATGAGCTGAAATTGGAGCTTTTTGACAAGGTTAATGTAGAGGAGAGCAAAATCAGTGTAGGAGTGCGAAGCATAATTGCTGTAGTGCAGAAAGCTGAGAGTGGATGGTGGAAGAGGTTGCTGCGTGGAGAAGGAAAGGCTCCACATTATGTGAAAGTGGATTGGGATAAATGGGTTGATGAAGATGAGGATGAAGGTGGTGATGTGGACTTGGGAGGAATGGATTTCTCGAAATTTGGCGGTGAAGGTGGAATGGGCGGAATGGGAGGATTGGGCGGAATGGGAGGATTAGGAGGAATGGGGGGACTAGAAGGATTGGGAGGAATGGGTGGACTGGGAGGAATGGGAGGAATGGGAGGACTGGGAGGAATGGACTTCTCTAAATTTGGTGGAATGGGTGGTGGCGACGCAATGGATGATATTGATGAGAGTGATGATGAAGGTCAAGAAGTGTCAAAGCCTGGTGAACAAGATGCTGGAAAGATCGGTAGTGAGCATGATGCTGCTGGCAAGAGTGCCGGTGAGGCAACTACAGAGAGTAAAGAAGCTACTCCAAGCAATTAG 714 0.479 MSRHPEVKWAQRVDKVYITVQLADSKDAKVDLTPEGEFIFSGSAGAGDNKYELKLELFDKVNVEESKISVGVRSIIAVVQKAESGWWKRLLRGEGKAPHYVKVDWDKWVDEDEDEGGDVDLGGMDFSKFGGEGGMGGMGGLGGMGGLGGMGGLEGLGGMGGLGGMGGMGGLGGMDFSKFGGMGGGDAMDDIDESDDEGQEVSKPGEQDAGKIGSEHDAAGKSAGEATTESKEATPSN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03493 237 Pfam CS domain 6 81 IPR007052 -
Vifa5g03493 237 Gene3D - 2 121 IPR008978 -
Vifa5g03493 237 MobiDBLite consensus disorder prediction 198 215 - -
Vifa5g03493 237 FunFam Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 125 - -
Vifa5g03493 237 ProSiteProfiles CS domain profile. 2 91 IPR007052 -
Vifa5g03493 237 PANTHER TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE 1 210 IPR045250 GO:0051879
Vifa5g03493 237 CDD p23_hB-ind1_like 5 113 - -
Vifa5g03493 237 MobiDBLite consensus disorder prediction 182 237 - -
Vifa5g03493 237 SUPERFAMILY HSP20-like chaperones 1 138 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03493 Vifa-Chr5 1145121248 1145123803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03493 - - psat:127132675 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03493 5 1145121248 1145123803 Vifa5g03493 5 1145121248 1145123803 ECH