Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03489 ATGGAGTTGATGTGTCATTCTTCAACTTTTCTTCTTCCGCCGGAAAATCCAAACACAGCTTCATCTTCTTCTTCTTCTGTTTCTCTAACGTACGCTCTTGTTGTTCTCAACCAAAATCTTCCCAAATTTACTCCTCTGCTTTGGGACCACGCACATATACGAGTTTGCGCTGATGGAGGTGCCAACCGAGTGTTTGATGAAATGCCTCTTTTGTTTCCTCAACTAAATCCTTCACATGTTCGCTCAAGGTACAAGCCTGATGCAATCAAAGGAGACATGGATTCAATCAGGACAGAAGTGCTTGATTTCTATGCAAACCTGGGAACAAAGATAATTGATGAGTCTCAAGATCAGGACACCACAGATTTACACAAATGTGTTGCATACATACGTGACCTTGTACCAAATACTGATAAATCAGAACTATGTATTCTCGCTACTGGAGCACTTGGCGGGAGATTTGATCACGAGATGGGAAATATTAATGTGCTCTGTCGATTCTCCAACACACGTATTATCCTTCTATCTGATGATTGCCTCATTCATCTTCTTCCAAAGAACCACTCACATAAGATCTTTATTCAATCTTCTATTGAGGGTCCACATTGTGGACTCGTTCCCATCGGGACGCCATCAGGAAGTTCTACAACCACCGGACTCAAGTGGGACCTCAATAACACGGAGATGAGATTTGGTGGTTTAGTAAGCACATCAAATATTGTAAAAGAGGATATAGTAACAGTACAGTCTGATTCAGATCTTCTTTGGACTATTTCCATTAAGAAGCTCTAG 792 0.4129 MELMCHSSTFLLPPENPNTASSSSSSVSLTYALVVLNQNLPKFTPLLWDHAHIRVCADGGANRVFDEMPLLFPQLNPSHVRSRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDLHKCVAYIRDLVPNTDKSELCILATGALGGRFDHEMGNINVLCRFSNTRIILLSDDCLIHLLPKNHSHKIFIQSSIEGPHCGLVPIGTPSGSSTTTGLKWDLNNTEMRFGGLVSTSNIVKEDIVTVQSDSDLLWTISIKKL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03489 263 PANTHER THIAMIN PYROPHOSPHOKINASE 4 261 - -
Vifa5g03489 263 FunFam Thiamine pyrophosphokinase 29 171 - -
Vifa5g03489 263 Gene3D - 172 262 - -
Vifa5g03489 263 PIRSF TPK1 2 263 IPR016966 GO:0004788|GO:0005524|GO:0009229
Vifa5g03489 263 SMART TPK_B1_binding_a_2_a 188 254 IPR007373 GO:0009229|GO:0030975
Vifa5g03489 263 NCBIfam thiamine diphosphokinase 33 258 IPR006282 GO:0004788|GO:0006772
Vifa5g03489 263 SUPERFAMILY Thiamin pyrophosphokinase, substrate-binding domain 182 262 IPR036371 GO:0009229
Vifa5g03489 263 Gene3D Thiamin pyrophosphokinase, catalytic domain 31 171 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vifa5g03489 263 FunFam Thiamine pyrophosphokinase 173 262 - -
Vifa5g03489 263 Pfam Thiamin pyrophosphokinase, catalytic domain 46 172 IPR007371 GO:0004788|GO:0005524|GO:0009229
Vifa5g03489 263 Pfam Thiamin pyrophosphokinase, vitamin B1 binding domain 190 255 IPR007373 GO:0009229|GO:0030975
Vifa5g03489 263 SUPERFAMILY Thiamin pyrophosphokinase, catalytic domain 30 180 IPR036759 GO:0004788|GO:0005524|GO:0009229
Vifa5g03489 263 CDD TPK 32 258 IPR007371 GO:0004788|GO:0005524|GO:0009229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03489 K00949 - gmx:100786303 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03489 5 1144001420 1144006836 Vifa5g03489 5 1144001420 1144006836 ECH