Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03487 ATGGCTTCTTCCACCTCAGACCTCAAACAACGATTCATCACACCCGATCAAACCACCAAAACAACCACAACAAACGACGACGACAAAGACAAAAATGGAACAATTAATCACAAAAGAGACAAACGAATGGCCATGGCCAAACGCGGTCTTAGATCACTCATAATAGCCCTTTCATTCCCTTTCTCAATAACCCTCCTCTCCATCTACATAGCCTCATCCTTCACCTTCTCCAACCACAACAACCAATCCATAACCTCTTCAACAAAGCCCTTCTGGTTTCCACCATCATGGCTCCTGCATCTCATGTTACCTTCTTCCACCTTCTTCATGGCTCTCTCAGCTTGGTTGGTTTGGGCTGAAGGTGGCTTTCATAGAGACCCAACTGCTTTTTTGCTTTACCTGATTCAGCTTCTCTGCACTGTGTTGTGGGAGCCTGTGGTTTTTGGAGTTGGGGCTACGAGTTTTGGTTTGTTGCTTTGTTTGGGAATTTTTGGGAGCTTGATTGGGTGTATGTATGTGTTTGGGAAAGTTAATTCTGTTGCTAGTGATTTGATAAAGCCTTGTTTGGCTGTCAGTGCTTTTCTTTTCATTGTAAATCTTAAGTTAATTTATATGTGA 618 0.4288 MASSTSDLKQRFITPDQTTKTTTTNDDDKDKNGTINHKRDKRMAMAKRGLRSLIIALSFPFSITLLSIYIASSFTFSNHNNQSITSSTKPFWFPPSWLLHLMLPSSTFFMALSAWLVWAEGGFHRDPTAFLLYLIQLLCTVLWEPVVFGVGATSFGLLLCLGIFGSLIGCMYVFGKVNSVASDLIKPCLAVSAFLFIVNLKLIYM 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03487 205 MobiDBLite consensus disorder prediction 1 21 - -
Vifa5g03487 205 CDD TSPO_MBR 70 200 IPR004307 GO:0016020
Vifa5g03487 205 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 45 203 IPR004307 GO:0016020
Vifa5g03487 205 Pfam TspO/MBR family 66 204 IPR004307 GO:0016020
Vifa5g03487 205 Gene3D TspO/MBR protein 52 205 IPR038330 -
Vifa5g03487 205 FunFam translocator protein 2 49 205 - -
Vifa5g03487 205 MobiDBLite consensus disorder prediction 1 35 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03487 K05770 - gmx:100785785 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03487 5 1143377105 1143377722 Vifa5g03487 5 1143377105 1143377722 ECH