Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03486 ATGGAAATCGGAGGCAGAAAACTGAAAAACACAGAAACAATGGCCGTCGAATCGGTTACCCAATCAGCACCACCGCCGAGATCGAAACCAAACAACACATATTTCGAAAACCCCAAAATTCCCATAGCAGTTGCTCTTCTCATTGCCGATGCCATCTTCGTCTTCCTCATCATCGCATTTGTCCCCTATACGAAGATAGATTGGGATGCTTACATGTCACAGGTTAAGGGGTTTCTAGGAGGTGAGAGAGATTACAGGAACCTGAAGGGTGATACTGGTCCTCTTGTGTATCCTGCTGGTTTTCTGTATATTTACTCTGCGTTTCTTTATCTTACTGGTGGAGAGGTTTACCCTGCTCAGATTTTATTTGGAGTTTTGTATATTATTAATCTTGCAATTGTTCTCTTCATATATGTCAAGACTGATGTGCTTCCGTGGTGGGCTCTTTGCTTGCTTTCTCTGTCAAAACGAGTGCATTCTATCTTTGTTCTTCGTCTCTTTAATGATTGTGTGGCTATGACTCTTCTTCACGCCGCATTGCTTTTACTCATGCATAGAAGGTGGAATCTGGGTTTGATTGTGTTTAGTGGGGCTGTTTCGGTAAAGATGAATGTGCTTCTTTATGCTCCCCCTTTATTGCTCCTCATGCTAAAGGCTATGGATATCGGTGGTGTGTTATTGGCCTTAGCTGGTGCAGCACTGGTTCAGATATTATTGGGGCTTCCTTTCTTGGTTTCATATCCAGTTGCATACATATCAGGAGCCTTCAATCTTGGCCGTGTTTTCATCCATTTCTGGTCTGTTAACTTCAAATTCATCCCCGAACCAGTATTTGTATCCAAGGGATTTGCGATCTTTTTGTTGGCTGCTCACCTCATAACTCTTGCTTCATTTGCACATTGTAGATGGTGCAAACATGAAGGAGGGCTTCTCAAGTTTCTGCATTCAAAATATGTCTTTATGAGACTGAGGTTTGCACTTTTCTTCTCCTCTTTTAAGAAGTTTGACGAGAGCAGTTCATCGTCCATCAAGATCCTTACTAAAGAACATATTGTGACTACTATGTTTGTTGGAAACTTCATTGGCATTGTATGCGCTCGGTCGTTGCACTATCAGTTCTATTCATGGTACTTCTATACCTTACCATACTTATTGTGGAGAACACACTACCCAACATTGATCCGATTGTTTTTGTTCGTGGGAGTGGAGGTGTGCTGGAATATCTATCCTTCAAACAACATTTCCTCAGCTGTACTTCTCTGCCTTCACTTAATTATTCTCTGGGGTTTATGGTCTGCTCCACCAGAGAATCCTTATGCAGAAAAAGAACCATCGTCCCACAAAGACAAATAG 1353 0.4198 MEIGGRKLKNTETMAVESVTQSAPPPRSKPNNTYFENPKIPIAVALLIADAIFVFLIIAFVPYTKIDWDAYMSQVKGFLGGERDYRNLKGDTGPLVYPAGFLYIYSAFLYLTGGEVYPAQILFGVLYIINLAIVLFIYVKTDVLPWWALCLLSLSKRVHSIFVLRLFNDCVAMTLLHAALLLLMHRRWNLGLIVFSGAVSVKMNVLLYAPPLLLLMLKAMDIGGVLLALAGAALVQILLGLPFLVSYPVAYISGAFNLGRVFIHFWSVNFKFIPEPVFVSKGFAIFLLAAHLITLASFAHCRWCKHEGGLLKFLHSKYVFMRLRFALFFSSFKKFDESSSSSIKILTKEHIVTTMFVGNFIGIVCARSLHYQFYSWYFYTLPYLLWRTHYPTLIRLFLFVGVEVCWNIYPSNNISSAVLLCLHLIILWGLWSAPPENPYAEKEPSSHKDK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03486 450 Pfam ALG3 protein 45 416 IPR007873 GO:0000030
Vifa5g03486 450 MobiDBLite consensus disorder prediction 13 32 - -
Vifa5g03486 450 PANTHER NOT56 - RELATED 37 435 IPR007873 GO:0000030
Vifa5g03486 450 MobiDBLite consensus disorder prediction 1 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03486 27 450 Miscellaneous Gene Families AT2G47760 70.353 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03486 K03845 - gmx:100785253 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03486 5 1143308948 1143318254 Vifa5g03486 5 1143308948 1143318254 ECH