Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03479 ATGGCTGCACCCAAACCGCCACCACCTGATCATCATCATCAACAACTTCCTCCTGCATCAGAAACTCTCAAGTATCAGACATGGGTTTTGAAAGTCTTGATCCACTGCGATGGCTGCACAAAAAGAATCAAGAAAATTCTTCAAGGAATTGAAGGTGTTTACACAACAGAAGTTGATTCTATGCAGCACAAGGTTACAGTTACAGGAAACGTTGAAGCTGAGACTCTCATAAAAAAGCTTTCAAGATCAGGAAAATCAGTGGAACTTTGGCCAGAAAAACCACCTGAGAAGAAAGATAAAAAACCTTCAACAAAATCAAAGGAAGATCAAAAGAATGGTACTGAGCCAGTTGGTGAAAGTGGTCATGATCATGAAGATTGTATAGATGATGTAGGTGATGATGGTGGTGAAGAAGATTCAAATCATAATGATGGTGATACTGGTGGGGGTGATAATAAAAGTGAAGGGGGTGCTAAAAAGAAGAAGAAGAAAAAGAAAAATAGAAGTGGTTCTGTAACTTCTGTTCCTCTTAATAATGATGGAGGAGAAAAAGTGATTATTAGTACAGAAAAAATTGTTTCTCCCAACGAAATTATTGTCCCTCCAGTACTTCAGCAACAGCGTGGTTATGGTTATAATAACCCATATCCACCACATATGTACTATTCACACACTCCTCTTGCTCATGCACCACCACCTTATGGGTTAAGCTATAACACATCCTATCCTGTTAATACTACTTCTGGTTATTATGTTGGGGGTTCTATAATGCCTATGCATGCTAATTACTCTAGAGCTCCACCACCTCCTCCTCCGCCGTCTGGTCCGATTAATAACTATGGTTATCATCATGATCATGATGAATATGAAGGTGGATATTGCTCCATTATGTGA 894 0.3926 MAAPKPPPPDHHHQQLPPASETLKYQTWVLKVLIHCDGCTKRIKKILQGIEGVYTTEVDSMQHKVTVTGNVEAETLIKKLSRSGKSVELWPEKPPEKKDKKPSTKSKEDQKNGTEPVGESGHDHEDCIDDVGDDGGEEDSNHNDGDTGGGDNKSEGGAKKKKKKKKNRSGSVTSVPLNNDGGEKVIISTEKIVSPNEIIVPPVLQQQRGYGYNNPYPPHMYYSHTPLAHAPPPYGLSYNTSYPVNTTSGYYVGGSIMPMHANYSRAPPPPPPPSGPINNYGYHHDHDEYEGGYCSIM 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03479 297 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 21 297 - -
Vifa5g03479 297 CDD HMA 34 88 IPR006121 GO:0046872
Vifa5g03479 297 Pfam Heavy-metal-associated domain 34 85 IPR006121 GO:0046872
Vifa5g03479 297 MobiDBLite consensus disorder prediction 82 129 - -
Vifa5g03479 297 ProSiteProfiles Heavy-metal-associated domain profile. 25 88 IPR006121 GO:0046872
Vifa5g03479 297 MobiDBLite consensus disorder prediction 141 157 - -
Vifa5g03479 297 MobiDBLite consensus disorder prediction 82 181 - -
Vifa5g03479 297 Gene3D - 23 89 - -
Vifa5g03479 297 SUPERFAMILY HMA, heavy metal-associated domain 25 91 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03479 Vifa-Chr5 1142244683 1142245832 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03479 - - psat:127132690 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03479 5 1142244683 1142245832 Vifa5g03479 5 1142244683 1142245832 ECH