Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03460 ATGAATCCTATTTGTTTTGATGGCAACAAACAAGGCAGTGAAGTGAAATCTGCCGGAGGATTTCTTACTTCGGATGTTTCTCACATGGAAGATGAGTTTGGAGAGCCGGAAGTGGAGCCTCGTGTTGGAGACGAGTACCAGGCGGAACTTCCTGCATATATCGGGGCACCGTATCGGTCTCAGATTGTAAAGAAAACAGGAGATTCGGAGATCGCGGACAATATGCCGGAGTCTTTTTTGCTAGGATTGCCCCTTCCTCTTATGTGGACACATTGTGAATTTGAATCTGTCCCAGGTCGAAAGGGGCATGTTGTTTGTGAAGGAAAAAGTGTAGGAGGGTTTTCGAATTTTAAGTCCTCTTGTAGAAATGACACGGCTGATATTGGCTCGGAACTGAGAACCGAACTAGATCCGCCAAGAGGCAGATATCTTCTTCCTGAATTGTTGTGTAGTCAGACTTGGACAGATATTGAATATAACAGTTTTCTTCTAGGCCTCTATGCATTTGGAAAGAGCCTTAATTTTTTGAAGAAATTTGTTGGGACTAAAAGTATGGGAGACATATTGTTTTTCTATTACGGTAAATTTTATAAGTCTAAAGGATATTCCCGATGGGCACAATGCCGGAAGTCGAAAACTAGGCGATGTATATTTGGACAGAAAATATTCACTGGTTGGAGGCAACAAGAATTGCTATCAAGACTGTTTCCCCATGTCGCAAAGGACTGTCAAACTCATTTGACTGAGATTTCGAAGAATTTTGGGGAGGGAAAGATGGCATTCGAAGAATACATATTTGCTCTAAAGAATGCTGTTGGCATTGAGGTCCTTATAGCTGCAGTAGGTATTGGCAAAGGGAAGCATGACCTTACAGGCACCGCTCTTGAGCCACCAAAAATCAACCACACCCTTCCTGTCCGCCATGAAATGCCAGCCGGAAAAGCTTGCTCCTCTCTTACATCTGCAGATATAATGAAGATCCTAACAGGAGATTTTAGATTAAGTAAAGCTCGATCTAGTGATCTTTTCTGGGAAGCTGTTTGGCCTCGTCTTTTAGCAAACGGTTGGCATTCTGAAGAGCCAAAGGATAATTTTGTTTCTGTAACAAAACAAACTCTGGTTTTTCTTGTACCTGGTGTTAAGAAGTTTTCAAGAAGGAAACTGGCCAAAGGTAACCAATACTTTGATTCTATAAGTGATGTACTGAATAAAGTGGCATCTGACCCTAGTCTTCTTGAGACTGAAGTTCAAACAAATGAGGGTAGTGCCGATAACAAAAACATTCAAAACAACGGAAACCAAGATGGTGTGTCAAATACACATCAATGTCCTTTGTTTCAATCTCCCAGTTCAAAGTGCAAACCGGATCTCGTGAAATTTACAATTGTGGATACCAGCATGGCTCATGATACCGATCAACATAAAGTGAGACAAATGAAAAGCTTACCTTTTCAACCTGGGAATATATCTACCATCTCAAGCTGCAGTTCTAGTGAATCTGAGACAACTACATCTGAAGACTCGGAAGATCAGATTGAGCAAGCTAATGCTTCAAGTCCTATTGAAGATCGGGTTGAACAAGCTAATCCTTCACAGCTTGCTGAAGATCAGGTTGAACATGCTAATTCTACATACCATGTTAAAGATCAGGTTGAACATGCTAATTCTACATACCATGTTAAAGATCAGGTTGAGAAAACCAATTCTTCATACCGTATTGAAGATCGGGTTGAACATGCTAATTCTTCGGACCGTGTTGAAGATCAGGTTGGACATGCTAATTCTTCGTACCGTATTGAAGATAAGGTTGAACATGCTAATTCTTTGTACCGCATTGAAGATCATGTTGAGCAAGCTAATGCTTCAAACCTTATTGAAGGTCAGGTTGAACATGCTAATTCTTCGTACCGTATTGAAGATAAGGTTGAACATGCTAATTCTTTGTACCGCATTGAAGATCATGTTGAGCAAGCTAATGCTTCAAACCTTATTGAAGGTCAGGTTGAGCAAGCTAATGCTTCAAACCGTATTGAAGGTCAGGTTGAGCATACCAATTCTTCAAACCACATTGAACATGCTAATTCCTATAACCATGTTGAAGAAATCTCAGATAGGGGGGCGCGCGTAGACTTATCAGGTCACACTCGAAATTTTGATCTGAATGAAGATGAGCCTACAGAGGAGATGAACGAGCAGCCATTGATTCAAAAGATGACATCTGATGATTGCAGAAAATATTTTCCCTGCACCTCAAAGATGCCGGAGTTAAGAGCTTGTGACCACGGAGAGTCTAGCCTTAGTGCTAAAAATACTTCTATGGACAGAAATTTTGATTTAAATGAGCCATTCTCACAGTCAGATCCACTTGAAGCATCTGAGGGCATGGATCTGTCTGTAGGTGTAGAAACTTTGTCTTCCCCAAGTTATCTGGCTAAAGGCAATCCTAACATGAGCAATGAAGGCAGTGTCACTGAGAATCCCCAGGTTGGAGAAGTCTCTGCAGAAAATTCTGAAAACAGGATGTTGATTGACTTGAATTTTCCTCAAGTTGCACCCGACTTAACACTTGAAATGGAAATACCATCCTCCTCTAAGGCAATACAACAAAACGATGACCAACATGCTCAAACATTGTCACCATCATCATCTGAGACAACTCAGCACAACGCAATAAATGAGATTCCTGATTTAAATAAGGAGCACCAACCGGTCATTGTTAACCGTCGTCAAAGTACTAGGAACCGACCGTTAACCACAAAGGCATTGGAAGCTCTTGAGTACGGATTTCTCAACTCAAAGAGGAAGAGGAAGAACTCAGAACCTTCCGACAATAATTCAAAGTCGCAATGTTTACGTCCAAGTAGCGAGACAATTATCGGTGCTACTTGTGATGATACCATTGAGAATTCTATTGCTGACACAAGTGCAAAGGAGGAGAATGTCATCCGGGAATATAGTTTCATTGTTTAA 2970 0.4111 MNPICFDGNKQGSEVKSAGGFLTSDVSHMEDEFGEPEVEPRVGDEYQAELPAYIGAPYRSQIVKKTGDSEIADNMPESFLLGLPLPLMWTHCEFESVPGRKGHVVCEGKSVGGFSNFKSSCRNDTADIGSELRTELDPPRGRYLLPELLCSQTWTDIEYNSFLLGLYAFGKSLNFLKKFVGTKSMGDILFFYYGKFYKSKGYSRWAQCRKSKTRRCIFGQKIFTGWRQQELLSRLFPHVAKDCQTHLTEISKNFGEGKMAFEEYIFALKNAVGIEVLIAAVGIGKGKHDLTGTALEPPKINHTLPVRHEMPAGKACSSLTSADIMKILTGDFRLSKARSSDLFWEAVWPRLLANGWHSEEPKDNFVSVTKQTLVFLVPGVKKFSRRKLAKGNQYFDSISDVLNKVASDPSLLETEVQTNEGSADNKNIQNNGNQDGVSNTHQCPLFQSPSSKCKPDLVKFTIVDTSMAHDTDQHKVRQMKSLPFQPGNISTISSCSSSESETTTSEDSEDQIEQANASSPIEDRVEQANPSQLAEDQVEHANSTYHVKDQVEHANSTYHVKDQVEKTNSSYRIEDRVEHANSSDRVEDQVGHANSSYRIEDKVEHANSLYRIEDHVEQANASNLIEGQVEHANSSYRIEDKVEHANSLYRIEDHVEQANASNLIEGQVEQANASNRIEGQVEHTNSSNHIEHANSYNHVEEISDRGARVDLSGHTRNFDLNEDEPTEEMNEQPLIQKMTSDDCRKYFPCTSKMPELRACDHGESSLSAKNTSMDRNFDLNEPFSQSDPLEASEGMDLSVGVETLSSPSYLAKGNPNMSNEGSVTENPQVGEVSAENSENRMLIDLNFPQVAPDLTLEMEIPSSSKAIQQNDDQHAQTLSPSSSETTQHNAINEIPDLNKEHQPVIVNRRQSTRNRPLTTKALEALEYGFLNSKRKRKNSEPSDNNSKSQCLRPSSETIIGATCDDTIENSIADTSAKEENVIREYSFIV 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03460 989 PANTHER ATROPHIN-RELATED 27 940 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 865 887 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 414 443 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 932 953 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 483 502 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 810 836 - -
Vifa5g03460 989 SUPERFAMILY Homeodomain-like 152 200 IPR009057 -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 471 530 - -
Vifa5g03460 989 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03460 Vifa-Chr5 1138647366 1138651191 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03460 - - psat:127132703 1574.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03460 5 1138647366 1138651191 Vifa5g03460 5 1138647366 1138651191 ECH