Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03447 ATGATTTCTGCTGGAGATAGGGATGAAATAAAGGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGTTTGGGTAGTAGAAGGAGAGAGATGGTGGAGTCTGAGCTTGAAGAAGGGGAAGCTTATTCTTATCAGAACCGTGAAGATTATGATGCCACTGTTGATCCTGATGTTGCCCTCTCTTACATTGATGACAAAATTCAAGATGTCCTTGGACACTTTCAGAAAGATTTTGAAGGCGGGGTGTCAGCAGAGAATCTGGGGGCGAAATTTGGTGGTTATGGATCATTTTTGCCGACCTATCAGCGCTCACCTGCTTGGAATCATCCAAGAACTCCACATAAAAATCATACTCAAAATTCGCCCAGATCTCCGAATAACTTCAACTCAGAGATTGGACAAGGGGATGCTTCAACCGGAGCTCAATTATCGAGACTTGGCCCAGGTTCTGCTACCTCCTCGAGGCTGGCTGCAATAAAGGGACTCTCTTCAGATGATGGATCCAATCACGAAAAATGCCCAGCTATCACTAATGCTGAGGCATTAAATTCCAAGTTCGAGTCTGTTATGAAAGCTGGCAGCATATCAGACCCGAAAACACTGAAAGTTCGAATTAAAATGGGTCCTGATGATTTGTCGACACGTAAAATTGCGGATATATACAGTGGACTTGGCCTTGATGTGTCACCGTCTCCATCACCGGATGACAGCCCCTCAGGAAGTGAAGGAAATTCTCGTGGTCCTCTAGATGATCCCTTTGAATCTCCTACCAGTATCATTAAGATTATGACAACTCTCCCTAAGTTGTTGTCGCCCCTTCCCGATGATCTCATTGAATTAATTGAGAAGGAAGTGCGCACCAGAGATAGCATCCTCGGTCCGGATCATATTGATGGCCAAGAAAGTTCCGGCATGTTACTAAATGAATGTAATACTGTAAAAGGTGACAGAAAATTCTTCGGAGGGAAAAGAGTGAAGCCCCTAGAGGGTTACGAGTCCTTGAGGGAAGTCAAGGGTTTTGATAAGAAGAATACTCGTAATGATGTTGGAGGGTCGTCAAGGAAAGAACCAAGTGCAGATGCATTGACTATGGAGGAAATGGTTTCAAAATCCATGAAACTTCCACTTTTGTCCAATTCATATCCTTTCTACGATGATCCGGTAAAGGATGTAGATGGGCCATGTAATTCATTGAAGGAAGCCAACAAGGGTGTGGTGAAGGAGAAAACCTTGTCGGACCAAGCACAAAAGGAACGGGTGGATCATGCATCTGCGAAAGTGAATGGTTTTTCTGAGAGGGCAAAAGGAGGTTCTGGAAGAAAAGCTGTGGGTGATAAGGTTTTGCTTGATGACACAATAATAGCTGAATCTAATGTTTCCAAAGTTAAGACAGCATTAAACACTGAATGTGTAGAGCCTCCCAAGAAGGCGGCTAGTCAGAGAGGTAGCCTCGGCGAACAAGACAGTACGGCATTGCCTTCCTTGACAGAACATCCTTGTCCTGGAGGGAAGAAGAAGTCAAAGGGAATTCATGACACCATGGTTATAGAGAGGGAAAAAGAAAACCTGAAGGTTGGATCTTCTTTGATTCCCAAACCAAAAAAGAGTTCTGATGATAGTTATACATCAAAAAATGAAATTGACGATCTCAAAGTACAAAAGGGTCACGTAAAGGCTAGGGATGCATATAGAGATTTCTTTGGCGAATTGGAAGAAGACGAGGACAAAATTGATTCACTGGAAACTCCTTGTGAAGATAAACTGAAGGAACCTGAGGCGGTTGAGAGGAGTGTGGCCGAAACAAATCTTGGAGCAAAGGAAAGATCAGGTGGTAAGAAAATTGATAAGTCATCGACAACAGAAGTAAATCCTAAAACAGCCACAAATGGCTGGTGCACTGGAAATGCACCTAGTACTGTTGTGGAGAATGGAAACGGGGTTCCTGCAATGTTGCCTCTTGTTGAGATGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGCTGGCAAAAATCCTGAAAGCCTACCTGAAAAGTGGCTGTGTAGCATGCTTAATTGGCTGCCTGACATGAATCGTTGTAGTTTTAGTGAAGATGAAACCACTAAAGCCCTTTTTTCTCTATACCAAGGGCATTCTCTTGATGCTCAAAACAACCTGCAAAATGTCTCGGGAACTGTGGCAACTTTGCAGCATCCTGGTCAACGCCAGCTAAATAATGATATGCATGCTGGGCCTGGTGGGAAGAAAAGAGTTGGGAAAGAAATTTCAAATTCTTCAAATAAAGAAGGCGTTTCTCAATCTTCTCATTCTATAAAGAAAAACCATCAGTCATCAGTGAAAAGTCGGAGCTTAAATGACGTGAACAAATCTCCCGTTGTGAGTGAAGCTGATGCCCAAGGGGAGAAACACAAACATAAGCCAAGGATGCCGGAGTACAATTCTGATAGAGGTGATGTGAAGAATATGAAAAGCAGGAGGGATCCTGATGAAGATTGTTTGAGGCCATCCAAGAAAAGTAAGACTGACTTGGTTCAATCTGCTGATAAAGAGTGGATTCCAGAACAGAACGGAACCCCTAGGAAGGTCAATCATAGCTCAAACAACACTTTGCCAACTACTTCAGCTGGCAAAGATCGATCTAGACGGAGAGACCACTCCTCTTCGAGTGACTCCAAATTGGGAAAGGACAGGCCGCCGATTTCTTCTGAGAAGAGAAAAGATAAGGGTCGGGATTCCTTGGATGAGAGGTCCCTAGATTTGGGGAATCATGGTTCAAATGGTAGTGTGAAAAAGAGGAAATTGAAGGACTATCAGGATGCTCAAACTCGTAGCACAGGTAATCCTTTCCCACACGAGAGTAGAACTTCTGAGCAGGAGTTCAGTGGCTCCAGGAAGGAAAAGAAGGCAAGAAATTCAAGATCTGAAGGCAAAGAATCAAGTGCTAGTAAAGGCAGTGGCAGGACTGACAAAAAATCTGGTCATTCAAAGAACCAAAATTCCAGGCAAAATCATGGGAGCAATCATTCACATCGGAGCATGGACGGCATGGACAGTTCGAAAAGGGACTTGGGGTCTGTACCGGCTTCTGTTGCCGCCACTTCCAGCTCTTCTAAGGTATCTGGCTCACATAAAACCAAAGCCAGCTTCCAGGAAATGAAGGGCTCCCCTGTGGAATCAGTTTCCTCCTCGCCTTTAAGAAATTTAAGTACAGATAAGTTTTCAAACAGAGACGTTATTTGGAAAGATGTGACTCGTGAAACTACTGCTGTGGATAGTCCAAAAAGATGCTTAGACGGCGAAGATGATGGTGCAAGTGATCGTTCGGAAACAGCTAGGAAGGACAAATCTTTTTCCATGGGCCACAGGTCTGATTTTCAGGGAAAGGGTGTTGTTAATCATATATCAGATACTGAGCCTAAAGCGCAAACAACCAGCCATTATGCCAATGGTGGTGCTGATATTGTGGCCCCGGATGGGACATATCCAGGTGCAGAGCAGATTAAGGATCACGGCGAAGACAGGACTGGTGTTTATTATGCCAACGCTAGTGTGTCTCACGCAAGGAAAACTGGCATGGAATCAGATTTGGAGGAAAACAAGCAGGGCTGTAAGTCAGAGCCCCCTGAAGTAAAAGTCAAGAGCTCTAGTTCTCCTAGTCATCTGCCAGATCAGTCTCCTCTTTGCGAGACAAAGCATAGGGATGGAAAAGTTAAGTTGCAGGATAAGTTGAGGCTCAAGCCTGACCTGAATGAGAATATTCATGCTAGCAAAAAAGACTTGACAGGAAAAAATGAAAGTAGGAAAAAAGAGAATCACGGAAAGAGAGGGCATGATGCTCAAGAGGGTCGCGTTGAAGCCCTAAGCAAATGGGAACCATTACATGCTCCCAGTAAGAATCAGTTGGCAGACTGTGATACCGAAAGATCTTCAAAGAGGTCTCTTTCAGAAAGACCTGATCAAGAAGTGCTTGGAAAAGGGAAGTCTCAAGTTGAGATTTTGAGTCATTGCCCACGACCAGTCGCTGGTTCCCATAGAGGAAATGGAGATATGGAAGTTGACCCGTCCAAAGCTGATGATGCGTCAAAGCTGCAAAAAAAGCAATCAAAAAAGGCTGATCATCAAAATGGAACTCAGCAAGTTGGTTCCAAAAATCACGCACTTAATGGACACAGATCCAAGGAACTCGATGCCCCTAGTCCACTTAGAAAGGATTCTTACACCCATGCTGCTAACAATGCTGTTAGAGAAGCTAAAGATCTTAAGCACCTGGCTGATCGTCTCAAGAATTCTGGATCCACTCATGAGAGCACAAATCTGTACTTCCAGGCAGCCCTTAAGTTTCTTCATGGAGCCTCTCTATTAGAGTCTGGCAACAGTGATAATGCAAAACACAGTGAGATGATTCAGTCAAAGCAGATGTACAGTAGCACAGCAAAATTGTGCGAGTTTTGTGCCCATGAATACGAGAAATCAAAAGACATGGCTTCAGCTGCTCTGGCCTACAAATGCACGGAGGTGGCATATATGAGGGTAATATATTCTTCACACACTAGTGCAAGCAGAGATCGGTATGAGTTGCAGTCTGCCCTGCAAATGACTCCTCTTGGCGAATCTCCGTCATCATCAGCCTCCGATGTTGACAATGTTAACAACTCTACAGCAGTTGACAAAGTTGCCCTATCCAAGAGTGTCAATTCACCTCATGTTGCTGGAAACCATGTTATTGCTGCTAAAAGCCGTCCTAATTTTGTGAGGATACTTAGTTATGCTCAGGATGTGAATTTTGCCATGGAAGCCTCAAAGAAATCACGGAATGCTTTTGCAGCTGCTAATGCAAGCATGGGCGTAGGTAAGAATGGCGATGGTATTTCCTCTATCAAGAAGGCTCTTGATTTTAGCTTTCAAGATGTGGAGGGACTACTACGTTTAGTACGGCTTGCTGTGGAGGTCATTCATCGTTAA 4977 0.4414 MISAGDRDEIKGLGLGLGLGLGLGSRRREMVESELEEGEAYSYQNREDYDATVDPDVALSYIDDKIQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWNHPRTPHKNHTQNSPRSPNNFNSEIGQGDASTGAQLSRLGPGSATSSRLAAIKGLSSDDGSNHEKCPAITNAEALNSKFESVMKAGSISDPKTLKVRIKMGPDDLSTRKIADIYSGLGLDVSPSPSPDDSPSGSEGNSRGPLDDPFESPTSIIKIMTTLPKLLSPLPDDLIELIEKEVRTRDSILGPDHIDGQESSGMLLNECNTVKGDRKFFGGKRVKPLEGYESLREVKGFDKKNTRNDVGGSSRKEPSADALTMEEMVSKSMKLPLLSNSYPFYDDPVKDVDGPCNSLKEANKGVVKEKTLSDQAQKERVDHASAKVNGFSERAKGGSGRKAVGDKVLLDDTIIAESNVSKVKTALNTECVEPPKKAASQRGSLGEQDSTALPSLTEHPCPGGKKKSKGIHDTMVIEREKENLKVGSSLIPKPKKSSDDSYTSKNEIDDLKVQKGHVKARDAYRDFFGELEEDEDKIDSLETPCEDKLKEPEAVERSVAETNLGAKERSGGKKIDKSSTTEVNPKTATNGWCTGNAPSTVVENGNGVPAMLPLVEMEDNWVQCDRCHKWRLLPAGKNPESLPEKWLCSMLNWLPDMNRCSFSEDETTKALFSLYQGHSLDAQNNLQNVSGTVATLQHPGQRQLNNDMHAGPGGKKRVGKEISNSSNKEGVSQSSHSIKKNHQSSVKSRSLNDVNKSPVVSEADAQGEKHKHKPRMPEYNSDRGDVKNMKSRRDPDEDCLRPSKKSKTDLVQSADKEWIPEQNGTPRKVNHSSNNTLPTTSAGKDRSRRRDHSSSSDSKLGKDRPPISSEKRKDKGRDSLDERSLDLGNHGSNGSVKKRKLKDYQDAQTRSTGNPFPHESRTSEQEFSGSRKEKKARNSRSEGKESSASKGSGRTDKKSGHSKNQNSRQNHGSNHSHRSMDGMDSSKRDLGSVPASVAATSSSSKVSGSHKTKASFQEMKGSPVESVSSSPLRNLSTDKFSNRDVIWKDVTRETTAVDSPKRCLDGEDDGASDRSETARKDKSFSMGHRSDFQGKGVVNHISDTEPKAQTTSHYANGGADIVAPDGTYPGAEQIKDHGEDRTGVYYANASVSHARKTGMESDLEENKQGCKSEPPEVKVKSSSSPSHLPDQSPLCETKHRDGKVKLQDKLRLKPDLNENIHASKKDLTGKNESRKKENHGKRGHDAQEGRVEALSKWEPLHAPSKNQLADCDTERSSKRSLSERPDQEVLGKGKSQVEILSHCPRPVAGSHRGNGDMEVDPSKADDASKLQKKQSKKADHQNGTQQVGSKNHALNGHRSKELDAPSPLRKDSYTHAANNAVREAKDLKHLADRLKNSGSTHESTNLYFQAALKFLHGASLLESGNSDNAKHSEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCTEVAYMRVIYSSHTSASRDRYELQSALQMTPLGESPSSSASDVDNVNNSTAVDKVALSKSVNSPHVAGNHVIAAKSRPNFVRILSYAQDVNFAMEASKKSRNAFAAANASMGVGKNGDGISSIKKALDFSFQDVEGLLRLVRLAVEVIHR 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 801 852 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1215 1229 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 962 1001 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1354 1377 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 601 633 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 945 961 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 619 633 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 222 254 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1091 1409 - -
Vifa5g03447 1658 PANTHER CW-TYPE ZINC FINGER 28 1657 - -
Vifa5g03447 1658 Coils Coil 1415 1435 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1195 1212 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1033 1078 - -
Vifa5g03447 1658 Pfam CW-type Zinc Finger 658 704 IPR011124 GO:0008270
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 863 880 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1392 1406 - -
Vifa5g03447 1658 Gene3D - 652 708 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1309 1329 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 500 524 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 103 151 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1091 1126 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 471 545 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 739 1078 - -
Vifa5g03447 1658 ProSiteProfiles Zinc finger CW-type profile. 653 706 IPR011124 GO:0008270
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 1231 1293 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 881 923 - -
Vifa5g03447 1658 MobiDBLite consensus disorder prediction 762 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03447 Vifa-Chr5 1132889090 1132896194 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03447 - - gmx:100806105 2161.34