Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03437 ATGCGACTTTGTTGTCGGTGGCCAGAAACAGCGAGGAAGCTCTCCAGGGTTTTTGCAATGGAGGATACCCAAGAAATTGATGAGGTGCAAGAAGTGATTTCTGACAAAACATCTGAAAAGGAGGAAGAGACTCGTGATGAGGTTCTCGCACGCCACAGGAAAGAGATATCACAATTGCAGAAAAAAGAAGTTGAAATGAAAAAGCAAGCAGCTAGAGGTAGCAAGGCTGAGCAAAAAACTAAGAAAAAGCAAGTGGAGGAAGAGGTTTCTCAACTTTCTACTAAGCTCAAAGAGAAACATACCAAAGAACTGTCTACATTAGGCTATAGCAGTGGTAATGGAAATGAAAAGAGCAATTTAGACAATTTGGTGAAGGCCATAGCTGGAGTAACTGTTAGTAGTCAACCTGAGAATACAAAGGTCAGCAAAGCAAAACAGAGGCGTGACAAAAGAGCTCAACAAGAAGCAGAGAGGGAACTGAGAATCCAAGCCGAGCAGAATGACATTATAAGTGATCGCATGGTTGAAAATGAGAAACTGGAAAGGAAGTTGAAACCTCTCGGTTTGACTGTGTGTGAAATAAAGCCTGATGGGCATTGCCTTTACAGAGCTGTTGAAAATCAGTTGGGCCACCTCTCTGGGGGTAAATCTCCATATACATACGAAGAACTTCGAAAACTGGCAGCTGCTTACATGAGGAAGCATACATCGGATTTCCTTCCATTTTGCCTGTCAGAGAATTTAATCGAAGGTGACTCTGATGAATCAATTGCTCAGAAGTTTGAAAATTATTGCAAAGAAGTAGAATCCACAGCAATATGGGGAGGACAACTAGAGCTCGGTGCTTTGACTCACTGTCTGAAGAAGCATATTGTGATATTTTCAGGGTCCTTCCCTGATGTGGAGATGGGGAAGGAGTATAAACCGGTCGATGGTATTTGTTCGTCTAGTTCCAGTATCAAGCTTTCTTACCATAAGCATGCTTTTGGGCTTGGTGAGCATTATAATTCTGTGGTCTCAACATGA 1026 0.423 MRLCCRWPETARKLSRVFAMEDTQEIDEVQEVISDKTSEKEEETRDEVLARHRKEISQLQKKEVEMKKQAARGSKAEQKTKKKQVEEEVSQLSTKLKEKHTKELSTLGYSSGNGNEKSNLDNLVKAIAGVTVSSQPENTKVSKAKQRRDKRAQQEAERELRIQAEQNDIISDRMVENEKLERKLKPLGLTVCEIKPDGHCLYRAVENQLGHLSGGKSPYTYEELRKLAAAYMRKHTSDFLPFCLSENLIEGDSDESIAQKFENYCKEVESTAIWGGQLELGALTHCLKKHIVIFSGSFPDVEMGKEYKPVDGICSSSSSIKLSYHKHAFGLGEHYNSVVST 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03437 341 MobiDBLite consensus disorder prediction 141 159 - -
Vifa5g03437 341 Pfam OTU-like cysteine protease 195 335 IPR003323 -
Vifa5g03437 341 ProSiteProfiles OTU domain profile. 189 341 IPR003323 -
Vifa5g03437 341 MobiDBLite consensus disorder prediction 134 159 - -
Vifa5g03437 341 Coils Coil 49 102 - -
Vifa5g03437 341 FunFam Cysteine proteinases superfamily protein 175 340 - -
Vifa5g03437 341 SUPERFAMILY Cysteine proteinases 153 340 IPR038765 -
Vifa5g03437 341 Gene3D - 175 341 - -
Vifa5g03437 341 PANTHER OTU DOMAIN CONTAINING PROTEIN 51 339 - -
Vifa5g03437 341 MobiDBLite consensus disorder prediction 59 97 - -
Vifa5g03437 341 CDD OTU_plant_OTU5-like 180 339 - -
Vifa5g03437 341 Coils Coil 26 46 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03437 K18342 - gmx:100780620 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03437 5 1129079327 1129086319 Vifa5g03437 5 1129079327 1129086319 ECH