Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03433 ATGGCAGAGGGAGAGGAGCGTATCGAGCTTAAATTTCGTATATATGATGGAACGGATATAGCGCACGAGACTTATCCAGCATCTACTACAACAGTTGGTACACTTAAGCAAAAGCTTATTGCTGAGTGGCCTCAAGGAAAAACCGTTATACCAAAGTCAGTCAACGATGTAAAACTTATACACGCTGGTAAAGTTTTGGAAAACACCCTAACACTTGCTGATTCCAAAATAACTTTCGGTGACATCCCTGGTGCTATTATCATGCATGTTGTAGTACAGCCTCCTATAGCTAAAAAAAAGACAGAGAAGAAGAAAAAGGAGAACATGCAAAAGACGAGTTCATGCTCATGCACTATCCTATAG 363 0.405 MAEGEERIELKFRIYDGTDIAHETYPASTTTVGTLKQKLIAEWPQGKTVIPKSVNDVKLIHAGKVLENTLTLADSKITFGDIPGAIIMHVVVQPPIAKKKTEKKKKENMQKTSSCSCTIL 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03433 120 PIRSF MUB 1 120 IPR017000 -
Vifa5g03433 120 CDD Ubl_MUBs_plant 8 95 - -
Vifa5g03433 120 MobiDBLite consensus disorder prediction 99 120 - -
Vifa5g03433 120 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 119 IPR040015 -
Vifa5g03433 120 SUPERFAMILY Ubiquitin-like 4 98 IPR029071 -
Vifa5g03433 120 Gene3D - 1 101 - -
Vifa5g03433 120 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 118 IPR039540 -
Vifa5g03433 120 ProSiteProfiles Ubiquitin domain profile. 8 77 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03433 Vifa-Chr5 1127767785 1127779581 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03433 - - mtr:11423397 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03433 5 1127767785 1127779581 Vifa5g03433 5 1127767785 1127779581 ECH