Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03423 ATGGCTGGAATGAACAAGAATCAACAATCAAATTGGTGGTGGCTTGATACTAACACTAATACCAAACGTTCCCCTTGGCTTCAATCCACTCTATCTGACCTAAATGAGAAGACGGATGCAATGTTAAAGTTAATAGAAGAAGACGCAGATTCCTTTGCTAAACGCGCAGAGATGTATTACAAGAAACGACCCGAGCTTATAAGCATGGTTGAAGATTTTTATCGGACACACCGCTCGTTAGCTGAGCGGTATGATCAAGTCAAACCCGACACAGGAATCAGCCACCTCATGCCAGGAGGATCACCTTTTGCTTCGGCTAAGTATCAGATAGAGAAACTGATTAGTTTTGCAGATACCGGTTATGATACCTATTCGGAGAATTTCGATGTAGACGAGTCTGTGGAGTCTGAAGTTGATGATCCCGAGCAAGAAGAAAAAGAGGAGACCAAATTTAGTTACACAAAAGAAGAGCGAGTTTCGTCTGTGGCTGTCGCTGTCGCTGTCAACGACGAAGTAATGAATCTAAAAAACGAGATTAAGAGAATAAAGGAAGAGAATGAGATTCGTAAGGAGCAGTTGAAACAGAAAGATACTGTTTGTGATGAAGTAATGAAGTTGAGGGAAGAAATAGAAAAACTAAGGGAAGAGAATGAGGAACAAAAGGAACAACTGAAGCAAAAAGATGAACAGAAGATAGAGGTGATTAAACAACTGAGTTTAGCAGTAGATTTGTTGAAGCAAGACAATGTGAGCATGAGAAGCTTCATTGCTAACGAGTCCACTAAGAAATGGAAATTTCCATTTGAGTTCAACAAATTTGGTGGAGCATTTTCTGTGAAATTGTTTAATGGGACTCAAAGGAATCAGCCTAGTGTTGAGCTCTCTACAAGACGCGGTTAA 900 0.4033 MAGMNKNQQSNWWWLDTNTNTKRSPWLQSTLSDLNEKTDAMLKLIEEDADSFAKRAEMYYKKRPELISMVEDFYRTHRSLAERYDQVKPDTGISHLMPGGSPFASAKYQIEKLISFADTGYDTYSENFDVDESVESEVDDPEQEEKEETKFSYTKEERVSSVAVAVAVNDEVMNLKNEIKRIKEENEIRKEQLKQKDTVCDEVMKLREEIEKLREENEEQKEQLKQKDEQKIEVIKQLSLAVDLLKQDNVSMRSFIANESTKKWKFPFEFNKFGGAFSVKLFNGTQRNQPSVELSTRRG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03423 299 Coils Coil 165 237 - -
Vifa5g03423 299 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 91 IPR011684 GO:0003779
Vifa5g03423 299 Pfam KIP1-like protein 12 85 IPR011684 GO:0003779
Vifa5g03423 299 MobiDBLite consensus disorder prediction 132 152 - -
Vifa5g03423 299 PANTHER PROTEIN NETWORKED 4A 6 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03423 Vifa-Chr5 1123436708 1123438552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03423 - - gmx:100815707 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03423 5 1123436708 1123438552 Vifa5g03423 5 1123436708 1123438552 ECH