Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03422 ATGAAGAAAGAGAATGAAACAGTGATCATTGTTGGAGCAGGCCCTTCTGGTCTCTCAGTCGCAGCATCCTTAACAAACCAATCCATTCCCTACATAATCCTCGAGAGAGAAAACTGTTTTGCATCTCTATGGAAAAAATATTCCTACGATCGTCTTCATCTTCACCTCAAAAAGCAATTCTGCGAGCTTCCGCACAAACCGTTTCCATCTTCTTATCCATCATACATTTCTAAGGAAGAGTTTTTGCAGTATTTAGAAGACTACGTTTGTCACTTCAAGATCAATCCTGTTTATCACAGGACAGTGGAGTATGCGGAGTTTGATGAAGGTTGTGAGAAATGGAAGGTGAAGGCTATGAATAAGGATTCTGGTGAAGTTGAGGAGTATGGTGGGAGGTTTTTGGTTGTGGCTAGTGGTGAAACTAGTGACCCTTTTGTTCCTGAGATTGAAGGGTTGAACACTTTTGCTGGGAAACTCATTCATTCTACTGGGTTTAAGAATGGGAAAGAGTTTAAGGATGAACATGTTCTTGTTGTTGGTGCTGGGAATTCTGGTATGGAAATTGCATTGGATCTTGTCAACCATGGTGCTAAAACTTCAATTCTTGTTCGAAGCCCGGTTCATATATTGTCAAAGGGAATGGTGAACTTAGGGTTGTTTTTGATGAAGTATTTGTCAATGGAGATGGTGGATTCATTAATGGTGATGCTTAGTAAAATGGTTTATGGTGATGTGACTAATTATGGGGTTGGTAGGCCTAATGAGGGACCTTTTTACATGAAAGTTAAATACGGCAAGTATCCAATTATTGATGTTGGTACCTGTGAGAAAATTAAATCTAAAGAGTTAAAGGTGTTGCCAGCTGAAATAGAAAGCTTAAGTGGCAAGAATGTGTTATTCAAGAATGGTGAATTGTATACTTTTGACTCTATTATTTTCTGCACGGGCTTCAAGAGATCAACACATAAATGGCTTAAGGGAGATGATTATCTTTTGAGTGATGATGGTATTCCAAAGCAAAGTTACCCTTTTCATTGGAAGGGGAAGAATGGTTTGTATTGTGTTGGATTATCAAGGAGAGGTTTATATGGAGCTGCTCAAGATGCTGAAAATGTAGCAAATGATGTTAAATCCATCATGCAAAAAGTTATATGA 1155 0.3853 MKKENETVIIVGAGPSGLSVAASLTNQSIPYIILERENCFASLWKKYSYDRLHLHLKKQFCELPHKPFPSSYPSYISKEEFLQYLEDYVCHFKINPVYHRTVEYAEFDEGCEKWKVKAMNKDSGEVEEYGGRFLVVASGETSDPFVPEIEGLNTFAGKLIHSTGFKNGKEFKDEHVLVVGAGNSGMEIALDLVNHGAKTSILVRSPVHILSKGMVNLGLFLMKYLSMEMVDSLMVMLSKMVYGDVTNYGVGRPNEGPFYMKVKYGKYPIIDVGTCEKIKSKELKVLPAEIESLSGKNVLFKNGELYTFDSIIFCTGFKRSTHKWLKGDDYLLSDDGIPKQSYPFHWKGKNGLYCVGLSRRGLYGAAQDAENVANDVKSIMQKVI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03422 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 7 29 - -
Vifa5g03422 384 PRINTS Pyridine nucleotide disulphide reductase class-II signature 171 195 - -
Vifa5g03422 384 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 380 - -
Vifa5g03422 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Vifa5g03422 384 PRINTS FAD-dependent pyridine nucleotide reductase signature 175 193 - -
Vifa5g03422 384 PIRSF FMO 4 360 IPR000960 GO:0050660|GO:0050661
Vifa5g03422 384 SUPERFAMILY FAD/NAD(P)-binding domain 4 209 IPR036188 -
Vifa5g03422 384 Pfam Pyridine nucleotide-disulphide oxidoreductase 9 206 - -
Vifa5g03422 384 SUPERFAMILY FAD/NAD(P)-binding domain 175 378 IPR036188 -
Vifa5g03422 384 Gene3D - 1 383 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03422 Vifa-Chr5 1122401499 1122403192 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03422 K11816 - gmx:102668138 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03422 5 1122401499 1122403192 Vifa5g03422 5 1122401499 1122403192 ECH