Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03400 ATGGAAGGTTCCGCACTGTGGCAAGGTTCGGTTCTCGCTGGAATCCTCTTCTGGCTTCTTTCTTCTTCATATCTCAATCTCACTCTCAAACTTCGATCTTTCCTTCAACCTTTCGTTACTCACTATGTTCAAACTGGAACCCCAATTCTCCTCCAGATCCAGAGTTACAAAGCTGGATTCTTTGATATTCTTTTTTCTGGGTTATCTTGTGTTGTTTCCGTACCCTTTTACACCGCTTTTCTCCCTTTGTTATTCTGGAGTGGTCATGGTCAATTGGCTAGACAGATGACGTTGTTGATGGCGTTTTGTGATTATATAGGGAACTGTATAAAGGATGTGGTTTCTGCGCCGAGACCTGCTTCTCCTCCTGTGAGGAGAGTAACTTCTACAAAAGATGAGGAGGAGAATGCTTTAGAATATGGTCTTCCTTCTTCTCATACACTCAACACTGTTTGCTTATCAGGCTATCTTTTGCACTATGTCCTGACTCATGCTCAAATTCAAGGTGCCTATGTTAATTACTTCGGAGTATCCCTTGCTTGTTTGTTTGTGGCCCTCGTTGGATTGGGAAGAATTTATCTTGGTATGCACAGTTTGATTGATGTTGTTGCTGGCCTTTTTATTGGACTCGGAATCCTTGGATTTTGGCTTACAGTTGATGAATACATAGACAGTTTCGTTGTCTCGGGACAAAACGTTACAACTTTTTGGGCTGCTTTGAGCTTCCTCTTGCTTTTTGCTTATCCAACTCCTGAATTTCCAACTCCAAGTTTTGAGTTTCACACTGCTTTCAATGGTGTAGCATTGGGAATTGTGTCTGGGGTACAGCAAACATACACTCAATTTCATCATGCCGGTGTTCCTCAGTTATTCTCTGAACTGACAATACCCGTATTCATGGGAAGAATGCTCTTGGGAATACCTACAATTATAATTGTTAAATTCTGCAGCAAAACTCTTGCAAAATGGACTATCCCCGTGGTGGCAAACACATTGGGCATCCCAATAAAATCAACCACCTATATTCCCACATTTAACGGAGCTAAGACAGGAGAAAAGTCTAAGGCTTTTGATGTTGATACTGGAATTAGATTTCTACAATATGCAGGTCTTGCATGGTCCGTGGTCGACTTAGTGCCATCCATTTTTTCATACATGAACCTGTGA 1167 0.4165 MEGSALWQGSVLAGILFWLLSSSYLNLTLKLRSFLQPFVTHYVQTGTPILLQIQSYKAGFFDILFSGLSCVVSVPFYTAFLPLLFWSGHGQLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVRRVTSTKDEEENALEYGLPSSHTLNTVCLSGYLLHYVLTHAQIQGAYVNYFGVSLACLFVALVGLGRIYLGMHSLIDVVAGLFIGLGILGFWLTVDEYIDSFVVSGQNVTTFWAALSFLLLFAYPTPEFPTPSFEFHTAFNGVALGIVSGVQQTYTQFHHAGVPQLFSELTIPVFMGRMLLGIPTIIIVKFCSKTLAKWTIPVVANTLGIPIKSTTYIPTFNGAKTGEKSKAFDVDTGIRFLQYAGLAWSVVDLVPSIFSYMNL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03400 388 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 11 235 - -
Vifa5g03400 388 SMART acid_phosph_2 93 217 IPR000326 -
Vifa5g03400 388 CDD PAP2_SPPase1 60 217 - -
Vifa5g03400 388 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 16 223 IPR036938 -
Vifa5g03400 388 Pfam PAP2 superfamily 96 219 IPR000326 -
Vifa5g03400 388 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 17 339 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03400 - - gmx:100778490 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03400 5 1118506983 1118510525 Vifa5g03400 5 1118506983 1118510525 ECH