Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03381 ATGACAATAAAACCCCTCAATCTCTTAACAACAAAGCTTTCACCTCTAACAACAATGGTGTCAATCCTAATCCTCACCATCCTGGCTTTCTACTCGTTCCATTTCCCTCACTCTCTGAAACATCCAAACAAATCCACCACCTTCCAAAGCCTATTCCTCTCATCTTCTTCCAACTCCACCATCTCATCCTACCTCCGCACCCTCACCATGCACCCTCACCTCGCCGGAACCAAACCCAATTCCAACACCGCTCTTTTCGTTCTCAATCACTTCACTTCCTTAAACCTCGAATCCCATAAAACATCCTACAACGTTCTACTCTCTTATCCATTAAACTCTTCACTATCAATACACCTAACCAACGGTTCTTTCATCAACCTTCCTTTAACCGAACCATCCGAACCCGGTTCGGATATGGTTCACGCCTACCATGCCTATTCACCTTCCGGTTCGGTTTACGCTAAGGCGGTTTTCGTTAACTACGGAAGAGATACAGACTATCGTACGCTTGGGCTGGACGTTAAGGGCTGTATAGTGATAGTAAGAAAAGGCGGTGGATTGGGGAGGAATACGGTGGTTGAGAAGGCGGAGAAAAACGGTGCTGCGGCGGTTTTAATCTACAACGACGAAAATGACACGTGGCGTAATGGGTTTGAGAGAGGTAATGTTATGAAGGGTGTGGGGGACCCAGTGAGTCCTGGTTGGGGAAGTGTGGATGGGAGTGAGAGGTTGAGTTTGGAAGATAATGAGGTTATGGAAAGGTTTCCTAAAATTCCTTCCATGCCAATCTCTGCTAATGTTGCTGATGCTATTTTGTCTTCACTTGGGGGAAATTTGGTGCCTTTGGAGTGGAGGAATACCCTGAAATCTAAGGCTGTTATTAGCCATGTTGCTTCTGGTCCCACTATGCTCAATTTTACCTACTTGGGTGAAAAGAAGATGGCCACCATTCAAAATGTTTTTGCTGTCATAAAAGGATCAGAAGAACCTGATCGCCATGTTCTTCTGGGGAACCATAGAGATGCATGGACTTATGGAGCTGTTGATCCCAGCAGTGGAACAGCTGCCCTACTTGACCTTGCTCGACGATACTCTATTCTACTGAGTTCAGGTTGGAAGCCAAGGAGGACAATCGTTTTATGCAGTTGGGATGCCGAGGAATTTGGCATGATAGGATCCACTGAATGGGTTGAACAAAACCTTATCAATCTTGCTTCCAAAGCTGTAGCATACCTTAATGTGGATTGTGCTGTTCAAGGCCCTGGTTTTTTTGTTGGCTCAACTCCTCAGCTAGACAGTCTTATTCGCGAGGTCACAAAAAAGGTCAAGGATCCCGACTCTAAGGGTGTCTCAGTATACGAGACATGGGCTGCTTCCGATGCAGGAAATAATATTCAAAGGCTTGGTAGAGTTGATTCTGATTTTGCTCCGTTTGTGCAACATGCAGGGGTTCCATCTGTTGATGTGTATTATGGAAAAGATTTTCCGGTCTATCACACTGCTTTCGACTCCTATAACTGGATGGCAGAATATGGAGATCCATTCTTCCAGCGCCATGTTGCCGTTACTGGAATTTGGGGCCTTCTAGCTCTGCGCCTGGCCGATGATTCCATTCTTCCGTTCGATTATTTATCATATGCAAATGAGTTACAGTTGTACAGGGACAAATTGAGCAACGTGTTAGATCAGAAAATTTCTCTACTCCCGTTAACAACGTCAATCAAGGAATTTGCTTCTGCTGCAAAAGAAGTTGACGGCGAATTAAAGGAACTTAGATTGGCAGAAACTTCAGGTCAGTTGGTAGATATGAAAAGCCGAGCGATTAATGATAGATTAATGCTGGTAGAAAAAGGCTTCCTAGATGGAGATGGACTTAAAGGAAAACAGTGGTTCAAGCATCTTGTGTTTGGGCCTCCAGACGACGCCGAAAAGTTAGACTTTTTCCCTGGGATTGTTGATTCTACGACTAGGTCAAGCAGCATAAGTGAAAAAGAAAGACTAACAGAAATTCAACACGAGATCTGGAGGGTTACCAGAGCCATACAAAGAGCTACTTCAGCACTGAGAGGAGAATTCGCATAA 2082 0.4472 MTIKPLNLLTTKLSPLTTMVSILILTILAFYSFHFPHSLKHPNKSTTFQSLFLSSSSNSTISSYLRTLTMHPHLAGTKPNSNTALFVLNHFTSLNLESHKTSYNVLLSYPLNSSLSIHLTNGSFINLPLTEPSEPGSDMVHAYHAYSPSGSVYAKAVFVNYGRDTDYRTLGLDVKGCIVIVRKGGGLGRNTVVEKAEKNGAAAVLIYNDENDTWRNGFERGNVMKGVGDPVSPGWGSVDGSERLSLEDNEVMERFPKIPSMPISANVADAILSSLGGNLVPLEWRNTLKSKAVISHVASGPTMLNFTYLGEKKMATIQNVFAVIKGSEEPDRHVLLGNHRDAWTYGAVDPSSGTAALLDLARRYSILLSSGWKPRRTIVLCSWDAEEFGMIGSTEWVEQNLINLASKAVAYLNVDCAVQGPGFFVGSTPQLDSLIREVTKKVKDPDSKGVSVYETWAASDAGNNIQRLGRVDSDFAPFVQHAGVPSVDVYYGKDFPVYHTAFDSYNWMAEYGDPFFQRHVAVTGIWGLLALRLADDSILPFDYLSYANELQLYRDKLSNVLDQKISLLPLTTSIKEFASAAKEVDGELKELRLAETSGQLVDMKSRAINDRLMLVEKGFLDGDGLKGKQWFKHLVFGPPDDAEKLDFFPGIVDSTTRSSSISEKERLTEIQHEIWRVTRAIQRATSALRGEFA 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03381 693 FunFam Os01g0740650 protein 310 540 - -
Vifa5g03381 693 FunFam N-acetylated-alpha-linked acidic dipeptidase 2 541 691 - -
Vifa5g03381 693 Pfam PA domain 154 216 IPR003137 -
Vifa5g03381 693 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 17 690 IPR039373 -
Vifa5g03381 693 CDD M28_PSMA_like 315 541 - -
Vifa5g03381 693 SUPERFAMILY PA domain 105 321 IPR046450 -
Vifa5g03381 693 Gene3D Zn peptidases 59 540 - -
Vifa5g03381 693 Gene3D - 113 310 - -
Vifa5g03381 693 Pfam Transferrin receptor-like dimerisation domain 565 688 IPR007365 -
Vifa5g03381 693 Pfam Peptidase family M28 319 506 IPR007484 -
Vifa5g03381 693 SUPERFAMILY Zn-dependent exopeptidases 57 538 - -
Vifa5g03381 693 Gene3D - 543 693 IPR036757 -
Vifa5g03381 693 SUPERFAMILY Transferrin receptor-like dimerisation domain 540 691 IPR036757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03381 Vifa-Chr5 1115152791 1115158504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03381 K01301 - gmx:100818733 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03381 5 1115152791 1115158504 Vifa5g03381 5 1115152791 1115158504 ECH