Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03380 ATGGAGTACGATCCTAAAAGTAGCGAAACCCCTTTGTTATCTTCCAAAAAAACTTCAAAGCTTCAAACTTTGGGGAATATCATTGTCACTGTTGTTGGAACTGGTGTTCTGGGTTTGCCCTTTGCTTTTCGGGTTGCTGGTTGGGTTGCTGGGTCGCTTGGTGTGGCTATCGTGGGGATTTCTACCTACTATTGCATGCTCCTTCTTGTTAAGTGCAGAGATAAGTTGGCAATTGAAGAACCATTAGTGGAGACAAGATCATATGGAGATCTAGGTTATAGATGCTTTGGAACCTCGGGTCGGTATCTGACCGAAGTTGTACTTGTGATAGCAGAATGTGCAGGGTCTGTTGCGTATTTGGTATTTATAGGGCAAAACCTTGATTCTGTATTCCAAAGAAATGGACCCTCGATTACCACTTACATATTTATGCTAGTACCAGTTGAAATCGGATTGTCATGGATAGGGAGCTTGTCATCTTTAGCACCATTTAGCATTTTTGCTGATGTGTGCAATATCCTAGCTATGGGAATTGTAGTGAAGGAAGATGTACGACAGACCTTTGAAGGTGAACTTCCATTTGGGGACAGGACGGCAATCACATCAAACATTGGGGGATTACCATTCGCAGCAGGCATGGCTGTTTTCTGTTTTGAGGGATTTGGAATGACACTTGCCCTTGAGAATTCTATGCAGGATAAATCTAAATTTCCAAAATTGCTGGCTCAGACTTTTAGTGGGATAACTCTCGTATACATTCTTTTTGGGTTATGTGGTTACATGGCTTTTGGTGAAGAAACTAAAGATATTGTGAACCTTAATCTCCCTAGAAATTGGTCATCACTTACCGTACAGGTGGGATTATGCCTGGGGCTTATGTTCACATTCCCAATCATGTTGCACCCTATAAATGAAATTGTGGAAGGAAAACTCAAACTCATCCACAGAAACAACAACAATGATTCAACAGAACTAGGAAAAATTACAATATACACCAGCCGTGCTATTGTGGTGGTTGTGTTGGCCGTGATTGCTTCATTTGTGCCAGAATTTGGAGTATTCGCCTCATTTACGGGAAGTACCCTATGTGCTTTGCTCTCATTTGTTTTGCCAGCCACATTTCACCTAAAACTATTTGGCTCTTCTCTACGCATTTGGCAAATAGTCCTAGATTTTATTGTATTAATCAGTGGAGTATTTTTCGCTGTTTATGGAACTTACAATACAATTGTTGGAGTTGAAGTCTGA 1248 0.4095 MEYDPKSSETPLLSSKKTSKLQTLGNIIVTVVGTGVLGLPFAFRVAGWVAGSLGVAIVGISTYYCMLLLVKCRDKLAIEEPLVETRSYGDLGYRCFGTSGRYLTEVVLVIAECAGSVAYLVFIGQNLDSVFQRNGPSITTYIFMLVPVEIGLSWIGSLSSLAPFSIFADVCNILAMGIVVKEDVRQTFEGELPFGDRTAITSNIGGLPFAAGMAVFCFEGFGMTLALENSMQDKSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVNLNLPRNWSSLTVQVGLCLGLMFTFPIMLHPINEIVEGKLKLIHRNNNNDSTELGKITIYTSRAIVVVVLAVIASFVPEFGVFASFTGSTLCALLSFVLPATFHLKLFGSSLRIWQIVLDFIVLISGVFFAVYGTYNTIVGVEV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03380 415 Pfam Transmembrane amino acid transporter protein 17 410 IPR013057 -
Vifa5g03380 415 PANTHER AMINO ACID TRANSPORTER 14 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03380 Vifa-Chr5 1114752999 1114754825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03380 6 413 Organic Solute Cotransporters AT3G11900 62.560 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03380 K14209 - gmx:100305659 631.328