Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa5g03379 | ATGGCTAAAACAAATAAGAAACGCACAGGAAAATCTCCTGGTAAAAGAAGTGATAATCAGAATGAGGATGATGATTGGGTTATTGTTAAAAAGCAGAGAGTCATCATTCTAGTGCCTGCTGCACCTCTTAGTGAAAGATCCTCAACAGAAAACGCAGAGCCGAATCACATGCATCCTATGCCTTCTGTAACGTCAAGTAACCACGAGGAACTTCCCACGGATAGTGGTAATGAAAATCCTTCTTGTAATGAACAAGAGAAGACCATTTCATTGGCTGGCCAAACAGAGATTCATACTGTGACAAAAGCTGCACCTTCCTTGTTACTTAAATCACCTTCAGCCAATTCACCACGGGTAGATCAAAGGGTAGAATCAGAAAATCCACATCAAGTCAGTAGTTTGAAGTCCCAGAGATTAGTTGGATTGTCTAATACATCAAAAGCTATTAAGCAGCCAAGAACTTTACTTGCACCAAGGTCCTCCAACTTGTCCACTTTGAATCGAGGTCTGAGAGCGTCAAATCTCGAGAGAAAGCTTGAAAGAGCTGGTGGGTTGAACAAGTGGCTGACATCACTTGGATTGGATCAGTTTGTGAGAATGTTTCAGGGCAAGATTATCAGTAAGTATCAGCTTGTGAATCTAACCATGAAAAAACTCAAGGATATGGGTGCCAATGCGGTGGGACCTCGCAGGAAGCTCATCCACGCCATGGACTGTGTTTGCCAGCCATATTGCTTTGAGGCGATATAG | 750 | 0.428 | MAKTNKKRTGKSPGKRSDNQNEDDDWVIVKKQRVIILVPAAPLSERSSTENAEPNHMHPMPSVTSSNHEELPTDSGNENPSCNEQEKTISLAGQTEIHTVTKAAPSLLLKSPSANSPRVDQRVESENPHQVSSLKSQRLVGLSNTSKAIKQPRTLLAPRSSNLSTLNRGLRASNLERKLERAGGLNKWLTSLGLDQFVRMFQGKIISKYQLVNLTMKKLKDMGANAVGPRRKLIHAMDCVCQPYCFEAI | 249 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa5g03379 | 249 | SUPERFAMILY | SAM/Pointed domain | 184 | 242 | IPR013761 | - | |
| Vifa5g03379 | 249 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - | |
| Vifa5g03379 | 249 | ProSiteProfiles | SAM domain profile. | 185 | 243 | IPR001660 | GO:0005515 | |
| Vifa5g03379 | 249 | PANTHER | SCP160 | 145 | 247 | - | - | |
| Vifa5g03379 | 249 | Gene3D | - | 176 | 242 | IPR013761 | - | |
| Vifa5g03379 | 249 | MobiDBLite | consensus disorder prediction | 44 | 87 | - | - | |
| Vifa5g03379 | 249 | Pfam | SAM domain (Sterile alpha motif) | 185 | 239 | IPR001660 | GO:0005515 | |
| Vifa5g03379 | 249 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
| Vifa5g03379 | 249 | SMART | SAM_4 | 177 | 243 | IPR001660 | GO:0005515 | |
| Vifa5g03379 | 249 | CDD | SAM_superfamily | 185 | 236 | - | - | |
| Vifa5g03379 | 249 | MobiDBLite | consensus disorder prediction | 104 | 139 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa5g03379 | - | - | psat:127125488 | 438.343 |