Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03340 ATGAGAAGCAGATTCCTTAGAAAAATGAAACTCATCCCAACCAAAACAAACTTGAAACAAGGCCTTGTTTTTCATCTCAACACAACAGATATGTTTTGTATCCAAGAATGTCCAACTTCATCATTCTTTTATGACCACAAAGGAAACGATTCGAGGTGGACGGCCGCTCAGTGCGGAACAGGAAACAATCTTGATGAAAATGAGAAGAAGAATGATGATAAGATACATCATTTGGAGGGACAAGAATTCAACTTCAAATTAGCTACAAAAGAGTATCCATCTCTTCAAAGTTTTGAAGAAAAATGTCCACCTGGTGGAAGCAACTCAATCATTCTTTACACAACAAGTTTGAGAGGAATAAGGAAAACATTTCAAGATTGCAACACTATCCGTTTCTTGTTGAGAAGTTTAAGAATAATGTACCATGAAAGGGATGTGTCTCTACATTTGGAATATAGACAAGAATTGTGGAATATATTGGGACAGAAAGTGATTCCTCCAAAGCTTTTTATCAAAGGAAGGTACATTGGAGGAGCTGATGAAGTTATTGCATTGAATGAAATGGGCTGGCTTGGAAAGATTTTGGAAGGAACACCAACTGTTGTTTCTAGTGATTGTCTTTGCATTGGTTGTGCTAACATGGGATTTACTATTTGTTCAACATGTTGTGGAAGTTGTAAGGTCTTCATCAACAATGGTGACAGCAGCAACAATGAATGTTTCCTTAGATGTCATGATTGCAATGAAAATGGGCTTGTCAAATGTCCCATTTGTTGCTAG 780 0.3705 MRSRFLRKMKLIPTKTNLKQGLVFHLNTTDMFCIQECPTSSFFYDHKGNDSRWTAAQCGTGNNLDENEKKNDDKIHHLEGQEFNFKLATKEYPSLQSFEEKCPPGGSNSIILYTTSLRGIRKTFQDCNTIRFLLRSLRIMYHERDVSLHLEYRQELWNILGQKVIPPKLFIKGRYIGGADEVIALNEMGWLGKILEGTPTVVSSDCLCIGCANMGFTICSTCCGSCKVFINNGDSSNNECFLRCHDCNENGLVKCPICC 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03340 259 Pfam Glutaredoxin 110 176 IPR002109 -
Vifa5g03340 259 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 67 259 - -
Vifa5g03340 259 SUPERFAMILY Thioredoxin-like 102 196 IPR036249 -
Vifa5g03340 259 Gene3D Glutaredoxin 108 200 - -
Vifa5g03340 259 ProSiteProfiles Glutaredoxin domain profile. 98 202 - -
Vifa5g03340 259 CDD GRX_GRX_like 109 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03340 Vifa-Chr5 1103938036 1103938815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03340 K17479 - gmx:100812335 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03340 5 1103938036 1103938815 Vifa5g03340 5 1103938036 1103938815 ECH