Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03333 ATGGCAGCTATTCGGATGATAGATATAGCCGTCAACTTCACGGATGGCATGTTTAAGGGAATCTACAATGGCAAACAATGTCATGTTGCTGATATACCAACCGTTTTGAACAGGGCTTGGGCTGCTGGTGTCCACAGAATCATTGTAACTGGTGGATCCCTTCAGGAATCAAGGGAAGCTCTAGCAATTGCTGAAACAGATGGAAGACTTTTCTGTACAGTTGGTGTGCATCCAACACGTTGCAAGGAATTTGAGGAGAGTGGAGATCCTGAAAATCATTTTCAAGCTCTTTTGTCATTGGCTAAAGAGGGAATTCAGAAAGGAAAGGTGGTTGCAGTTGGAGAATGTGGATTAGACTATGATCGACTTCATTTTTGCCCCGCAGAGATTCAAAAGAAGTATTTCGAGAAGCAGTTTGAATTGGCATACATCACAAAATTGCCTATGTTTTTGCACATGCGAGCAGCAGCTGAAGATTTCTGTGAAATAGTTGAAAAAAATAAAGACAGGTTCTCTGGTGGTGTCACCCATTCATTTACTGGTACTACGGATGAGTGCATTAAGCTTCTCTCATTTGATAAAATGTACATTGGCATAAATGGGTGCTCCCTGAAGGCAACTGAGAACCTTGATGTTGTCAAGGGTATTCCTGTTGAGAGAATGATGATTGAGACAGACTCACCATACTGTGAAATAAAGAACACTCATGCCGGGATGGGTTTTGTTAAATCTAAATGGTCTTCTAAGAAGAAAGAGAAGTATGATCAAGAGTGCATTGTCAAAGGTCGTAATGAACCTTGTTTAGTTAGGCAAGTTCTTGAGGTGGTTGCTGGTTGTAAAAGCATCAATGACATGGATAACCTCAGTAGAACATTGTACCACAACACTTGCAGGGTGTTTTTCCCGCATGACTTGGATTCTGCAGCTGATGCTCTTCTAGCCGGCGATAATTCTTCATAA 960 0.4156 MAAIRMIDIAVNFTDGMFKGIYNGKQCHVADIPTVLNRAWAAGVHRIIVTGGSLQESREALAIAETDGRLFCTVGVHPTRCKEFEESGDPENHFQALLSLAKEGIQKGKVVAVGECGLDYDRLHFCPAEIQKKYFEKQFELAYITKLPMFLHMRAAAEDFCEIVEKNKDRFSGGVTHSFTGTTDECIKLLSFDKMYIGINGCSLKATENLDVVKGIPVERMMIETDSPYCEIKNTHAGMGFVKSKWSSKKKEKYDQECIVKGRNEPCLVRQVLEVVAGCKSINDMDNLSRTLYHNTCRVFFPHDLDSAADALLAGDNSS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03333 319 SUPERFAMILY Metallo-dependent hydrolases 6 301 IPR032466 -
Vifa5g03333 319 CDD TatD_DNAse 6 301 IPR001130 GO:0016788
Vifa5g03333 319 PIRSF DNase_TatD 1 304 IPR001130 GO:0016788
Vifa5g03333 319 ProSitePatterns TatD deoxyribonuclease family signature 2. 148 158 IPR018228 -
Vifa5g03333 319 PANTHER TATD FAMILY DEOXYRIBONUCLEASE 5 306 - -
Vifa5g03333 319 Pfam TatD related DNase 27 300 IPR001130 GO:0016788
Vifa5g03333 319 FunFam Putative tatD related deoxyribonuclease 1 307 - -
Vifa5g03333 319 Gene3D - 1 307 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03333 K03424 - gmx:100814321 582.022