Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03315 ATGGATATTGAGTCAACAAATCAAGTAAGCAAAGCTGGAATCTTATCTAGCATAGGTGGTTTCTTCAAGGCATTGCCTAAGAAGTTTAAGTCCAAGTTTATGAATGCATTAAAAAGTGTGAAAAAGATTGGAAAAGATGACCCTAGAAGAATAATCCACTCATTGAAAGTTGGAGTTGCTCTTACAGTTGTGTCATTGTTTTACTATTCAAGGCCTCTTTATAATGGCTTTGGAGTTGCTGGAATCTGGGCTGTTCTTACTGTTGTAGTAGTTTTTGAATTTACCGTTGGTGCAACCCTTAGCAAAAGTTTGAATAGAGGATGTGCTACATTAGTAGCTGGTGCTTTAGGGGTTGGAGGGCACCACTTGGCCACTGCTGTTGGAGAAAGAGGAGAAGTTATTGTTCTTGGAACCCTTGTTTTCATGCTAGCTGCAGTGGCAACATTTTTAAGATTTGTTCCAAAGATAAAGGCGAGATATGACTATGGGATGGTGGTATTTATATTGACATTCTGTTTGGTAACCGTTTCGGGGTATAGAGTGGATGAACTTGTTGAGCTTGCACATCAGAGACTTTCAACAATTATAATTGGAGCTGCAGCTTGCATGCTCATCTCCATATTTGTTTGTCCCGTTTGGGCTGGTCAAGACCTTCATAACTTGGTTGCTTCCAACATCGATAAACTAGCAAACTACCTTGAAGGCTTTCAAGGTGAATATTTTCACTCATCCGAGGATAAAGAAAAATCTAAGTCACTTCTACAAGGATATAAGAGTGTTCTCAATTCAAAAGCAATTGAAGAATCTTTGGCTAATTTTGCAAGGTGGGAACCAGGTCATGGCGGTTTTAGTCTTCGTCATCCTTGGATGCAATACTTGAAAATCGGAGTACTTGCTCGCGAATGTGCATACAAGATTGAAACCTTGAATACATATCTTAATCCTGAAATCCAAACTTGTTTGGAATTCAAGTGTAAAATTCAGGAAGCATGCACAAAGATGTGTTCAGAATCCAACAAAGCATTGAAAGCAATATCATCATCAATGAAAACAATGACACATCCATCAGCAGCTAAAAGCAACATAGAAAATTCAAAAAGTGCAATTGAAGAACTCAAACTTGTACTAGAAGTCATTTCCTTAGAGGATGTGGAGCTCTTAGCTATAATACCAGTTGCCACAGTTGCTGCAATACTTGAAGAAATAACTATTTCAGTGGAGAAAATCTACGAATCTGTTTCTGAGATTTCTCATTTGGCACACTTCAAGAATGTAGAATCCAATGTCTCACCAGAAAAGCCACCACTACTTCATAGAGGAGTCATAAAACCTGTTGCGGACATTGATAACGCACCACATGTTGAAATCGTGATCCAAGATTTATGTACAGACTCGCCTGACAAAGCCCGAAAATGCAGTGCAGAAATCATTAAAACATAA 1440 0.3854 MDIESTNQVSKAGILSSIGGFFKALPKKFKSKFMNALKSVKKIGKDDPRRIIHSLKVGVALTVVSLFYYSRPLYNGFGVAGIWAVLTVVVVFEFTVGATLSKSLNRGCATLVAGALGVGGHHLATAVGERGEVIVLGTLVFMLAAVATFLRFVPKIKARYDYGMVVFILTFCLVTVSGYRVDELVELAHQRLSTIIIGAAACMLISIFVCPVWAGQDLHNLVASNIDKLANYLEGFQGEYFHSSEDKEKSKSLLQGYKSVLNSKAIEESLANFARWEPGHGGFSLRHPWMQYLKIGVLARECAYKIETLNTYLNPEIQTCLEFKCKIQEACTKMCSESNKALKAISSSMKTMTHPSAAKSNIENSKSAIEELKLVLEVISLEDVELLAIIPVATVAAILEEITISVEKIYESVSEISHLAHFKNVESNVSPEKPPLLHRGVIKPVADIDNAPHVEIVIQDLCTDSPDKARKCSAEIIKT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03315 479 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 428 - -
Vifa5g03315 479 Pfam Aluminium activated malate transporter 42 417 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03315 Vifa-Chr5 1094923899 1094925818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03315 1 460 Miscellaneous Gene Families AT3G11680 55.626 5.20e-169 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03315 K25841 - gmx:100170704 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03315 5 1094923899 1094925818 Vifa5g03315 5 1094923899 1094925818 ECH