Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03310 ATGCAAATGCAACAAACTCAGCAAGCCACCGCGGCAACTATTCCAACCCCCACTCCTCCTCCCTCTTTCCCCGGTGGCCCCACGGCCGAGGCACCGCCGAAGCAAGTTGCTGTAGCAATGGACCAACTTGGACAAGCCGAAAGAATCATCGCTGACATCAGAATCGGCGCCGATCGCCTCCTTGAAGCTCTTTTCATTTCCGCCGGTCAGACTCACCAAGGCAGTAAGCCGTTGCAAGTTCTCCTCAAGGAAAATGCTTGCATGCAACAGCATTTTCAAGAGCTTCGATCACTTGGAAAGGAGCTTGAAGAAGCTGGAGTTGTCAGTGAATCGGCTCGAACGCGGAAGGATTTTTGGGGGCTTCATATGCCGCTGGTTTGCCCGGACGGTGCAGTTGTAGCTTATGCGTGGAAACGGCAACTCGCCGGTCAGGCTGGTGCTTCTGCAGTTGATAGGACAAGGTTAGCTCTCAAAGCTTTTACGGATCAGAAAAAACGCTTTTTTCCCCATCTTGATGATGAAGTTGAAACTAATGAATCAGCTTCAAAGAAACAATGTGGGTCTGAAGAAGTTTCATTTGAACCTAAGGAAGACATGAGTTTTCTGAGGTTGCTACCAGATGTTCTGAAGTCCGTGGAAAAGGAAGTGCCAACTGTGAAAATTTCAACTTTTGAACGATTGGACTGGTTAAAAAGAGCTTCCGCACTCACCTCTGCAACTAATGAGAGTTCTCAAGAACATAACTACCATGGTTCTAATAAACCGAGGGTAGGATCAATTGGAATAGTTGATCCAGAGAAGGTTGCAGTGATAGAAATATTGTCTCCATCTATCTTCAGAGCTGTTATATCATTGCATCCTGCTGGGTCCGCTAATGCTGATGCTGTAGCTTTCTTTTCTCCCGACGAGAATGGAAGCTATGTGCATGCAAGGGGGATTTCACTTCATCATGTGTATAGACATATTACGGAGTATGCAACAATAGCTCTGCAGTATTTTCTTGGCAACCAAGCTGAAACATCACTGTATTCTCTTTTGCACTGGATTTGTAGCTACCAGACCATATTTTCAAGACCATGCAGAAAATGTTCTAAGCTACTTGCCATGGATGATCAATCAAATTTGTTGTTACCTCCAGTTCACCGGCCCTACTGGAAGTTTTCCCTTTCAAAAATTTTGTCAACCATATCTTCAAAGGACCAGCATTCAGATACTACTATGGCCTATCATATTGGCTGCCTCTCTGGTGAAGTATGA 1257 0.4551 MQMQQTQQATAATIPTPTPPPSFPGGPTAEAPPKQVAVAMDQLGQAERIIADIRIGADRLLEALFISAGQTHQGSKPLQVLLKENACMQQHFQELRSLGKELEEAGVVSESARTRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDEVETNESASKKQCGSEEVSFEPKEDMSFLRLLPDVLKSVEKEVPTVKISTFERLDWLKRASALTSATNESSQEHNYHGSNKPRVGSIGIVDPEKVAVIEILSPSIFRAVISLHPAGSANADAVAFFSPDENGSYVHARGISLHHVYRHITEYATIALQYFLGNQAETSLYSLLHWICSYQTIFSRPCRKCSKLLAMDDQSNLLLPPVHRPYWKFSLSKILSTISSKDQHSDTTMAYHIGCLSGEV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03310 418 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 4 415 IPR021627 GO:0016592
Vifa5g03310 418 MobiDBLite consensus disorder prediction 14 28 - -
Vifa5g03310 418 Pfam Mediator complex subunit 27 301 413 IPR021627 GO:0016592
Vifa5g03310 418 MobiDBLite consensus disorder prediction 1 32 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03310 K15170 - gmx:100782776 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03310 5 1092160131 1092164469 Vifa5g03310 5 1092160131 1092164469 ECH