Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03260 ATGTCGGAGATGTTGGACGGTGCAATTCGACGAGTGGTTGTGATCGGAAACGGCTTCGCCGGCGCTGAGAATCAGAGCATTGGATTGGTTCGTGCTCTCGGTCTTTCCAATCGTTTCTCTTTATACCGTGTGACGAGGCCACAAGGAGGAATCAATAGGTGGTTCAAATGGCTTCCCGTTTCAATTCATAAAAAACTAGACTCCGTTGTGAGAAGAATCTGTGGCAATTCACGGTTTCAATCATTGAATTCCAACATTGGTAATGGTATATCTAATGTATTAGAAGCTGATGCGCATAGCATTGCGCTAATGGCGCGTGAAACGTTTTACAAAGATGGTCCTTTGTTGGTGGTGGCTTCTGGACGAGACACCATTTCTGTTGCCACTTCCATTAAACGGTTAGCTTCGGAAAATGTTTTTCTTGTTCAGATACAACATCCAAGATTCCTCCTTAATAGGTTTGATCTTGTGATTACTCCTCGCCATGATTATTATCCCCTTACTCCTCATGCCCAACAGCAATTACCTTGGTTTCTTCGGAGATGGGTCACTCCATGGGAACCTCCTGGCCGCAACGTGGTTCTTACTGTGGGAGCACTTCATCAAGCTGATTCGGCTGCTCTTAGGGTTGCTGCATCTGCTTGGCATCATGAATTAGCTACTTTGCCAAAACCCTTGCTCGTGGTTAACATCGGAGGACCTACAGGCAATTGTCCCTATGGTGTGGATCTTGCAAAGAATTTAGTGGTTATGCTTCAGAATGTTCTATGGAGCTGTGGGACAATCAGAATATCTTTCTCTAGAAGAACTCCTGAGAAGATCTCCAAAATTTTGATCAAAGAATTTTCCACAAATCCTAAGGTCCAAATATGGGATGGTGAAGGTCCAAATCCACATATGGGACATCTGGCCTGGGCTGACGCCTTTGTTATCACAGCTGATTCAGTTAGTATGTTGAGTGAGGCCTGCAGTACTGGGAAGCCTGTGTATGTAATTGGAGCAGAACTGTGTACGTGGAAGTTTGCTGACTTCCAAAACTCTTTGCAGAAGCAAGGAGTTGCTCGGCCGTTCACTGGGATGGAAAATATAAGTGAAAGCTGGTGTTATCCTCCACTGAATGACACAGCAGAAGCTGCTACTCAAGTGACCGCTGCCCTTGCTCAGCGGGGATGGACTATTCGTGCACAATGA 1191 0.4559 MSEMLDGAIRRVVVIGNGFAGAENQSIGLVRALGLSNRFSLYRVTRPQGGINRWFKWLPVSIHKKLDSVVRRICGNSRFQSLNSNIGNGISNVLEADAHSIALMARETFYKDGPLLVVASGRDTISVATSIKRLASENVFLVQIQHPRFLLNRFDLVITPRHDYYPLTPHAQQQLPWFLRRWVTPWEPPGRNVVLTVGALHQADSAALRVAASAWHHELATLPKPLLVVNIGGPTGNCPYGVDLAKNLVVMLQNVLWSCGTIRISFSRRTPEKISKILIKEFSTNPKVQIWDGEGPNPHMGHLAWADAFVITADSVSMLSEACSTGKPVYVIGAELCTWKFADFQNSLQKQGVARPFTGMENISESWCYPPLNDTAEAATQVTAALAQRGWTIRAQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03260 396 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 105 333 - -
Vifa5g03260 396 PANTHER OS02G0535700 PROTEIN 8 394 IPR009367 -
Vifa5g03260 396 Pfam Mitochondrial fission ELM1 20 386 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03260 Vifa-Chr5 1077591071 1077594327 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03260 - - gmx:100801126 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03260 5 1077591071 1077594327 Vifa5g03260 5 1077591071 1077594327 ECH