Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03218 ATGTTAATTCCTCTTTGCAACCCTTCTCTTTCGCTTCATTCAGCTTCAATTCATGGAAAACCTAACAAGACTATCGTCTCAATCACGAACTCTGCATCTTCCGGCAACAGAATAAGCACCCAGCGAAGAACTATCTCAGCATTCGAAGCTCGAATCTCTCTAATCTTCGCTCTCGCTTCCCAATCCACCTCTCTCTCGCAGCGACTTGTTGCCGATTTTGCTACCGACACTGCAAAATACTTGTTTCCTAAAAGATTTGAAAGCCAAACTCTCGAAGAAGCGTTGATGACCGTTCCGGATCTCGAGACTATCAAGTTCAAAGTTCTGAGTAGAAGGGATCGGTATGAGATTAGGGAAATTGAGCCTTACTTTGTAGCAGAGGCTACAATGCCTGGGAAGAACGGGTTTGATTTCAGCGGTGCTTCTCAGTCATTTAACGTTCTTGCTGAATACCTTTTTGGTAAGAATACAACGAAGGAAAAAATGGAAATGACTACACCCGTTTTTACCAGTAAGAATCAATCGGATGGGGTTAAAATGGATATGACAACTCCTGTGTTAACAACAAAGAATGGAGATCAAGATAAATGGAAAATGTCTTTTGTCATGCCTTCAAAGTATGGTTCTAATTTGCCACTGCCGAAAGATTCCTCTGTGACAATTAAAGAAGTGGCTAGAAAAATAGTTGCTGTAGTTGCCTTTTCAGGTTTTGTAAATGATGAAGAAGTTAAGCGGCGTGAACTGAAACTGAGAGAAGCTTTGAAAACTGATGGACAGTTCAAAATTAAAGAGGGAACTTCAGTAGAAATTGCACAGTACAATCCCCCATTTGCTCTTCCATTTCAACGCCGTAACGAGGTTGCATTGGAAGTGGAGTGGAAAAATCAGTAG 891 0.413 MLIPLCNPSLSLHSASIHGKPNKTIVSITNSASSGNRISTQRRTISAFEARISLIFALASQSTSLSQRLVADFATDTAKYLFPKRFESQTLEEALMTVPDLETIKFKVLSRRDRYEIREIEPYFVAEATMPGKNGFDFSGASQSFNVLAEYLFGKNTTKEKMEMTTPVFTSKNQSDGVKMDMTTPVLTTKNGDQDKWKMSFVMPSKYGSNLPLPKDSSVTIKEVARKIVAVVAFSGFVNDEEVKRRELKLREALKTDGQFKIKEGTSVEIAQYNPPFALPFQRRNEVALEVEWKNQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03218 296 Gene3D Regulatory factor, effector binding domain 175 296 IPR011256 -
Vifa5g03218 296 Gene3D Regulatory factor, effector binding domain 100 174 IPR011256 -
Vifa5g03218 296 Pfam SOUL heme-binding protein 172 289 IPR006917 -
Vifa5g03218 296 Pfam SOUL heme-binding protein 101 170 IPR006917 -
Vifa5g03218 296 SUPERFAMILY Probable bacterial effector-binding domain 96 172 IPR011256 -
Vifa5g03218 296 PANTHER HEME-BINDING PROTEIN-RELATED 72 170 IPR006917 -
Vifa5g03218 296 SUPERFAMILY Probable bacterial effector-binding domain 172 291 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03218 Vifa-Chr5 1066941187 1066944820 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03218 - - psat:127125647 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03218 5 1066941187 1066944820 Vifa5g03218 5 1066941187 1066944820 ECH