Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03215 ATGTCTCGCCAATCCTCTGCTGACTCTGATGACAAGATTCCTTCTCATCCATCTAAAGATGCCAACTTTGAGAAAAAACAAGATGACCCTTTTCTCTTGAGCACCCAAAAGAGCCAAAACCATGATGATAAAGATAAAGCATCTTTTGTTTGCAACAAGGAGAAAATGGCTTCTGCTATGGATGATGTAGAAGTTGAAGCAAAAGAGTTAACAACTGTGGATGAGGAATTGGAAGAGGTGAGTGAAAGAGAGAGGCTGAAGAGGCATAGAGTTGAAGTAGCTGGAAGGGTTTGGATACCTGAAATATGGGGTCAAGAGGAACTATTGAAGGATTGGATAGATTGCACTGCATTTGATGCTCCTTTGATTCCAAGCAAGATCACTATGGCACGTGCTGCTTTGGTTCAACAGGGTACTGCTAGAGCCAATGCTGCTCCTCTAAGTATAGATAACAGGTGTTAG 462 0.4221 MSRQSSADSDDKIPSHPSKDANFEKKQDDPFLLSTQKSQNHDDKDKASFVCNKEKMASAMDDVEVEAKELTTVDEELEEVSERERLKRHRVEVAGRVWIPEIWGQEELLKDWIDCTAFDAPLIPSKITMARAALVQQGTARANAAPLSIDNRC 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03215 153 PANTHER PROTEIN BIC1 12 153 IPR040374 GO:0009785
Vifa5g03215 153 MobiDBLite consensus disorder prediction 1 31 - -
Vifa5g03215 153 MobiDBLite consensus disorder prediction 1 47 - -
Vifa5g03215 153 Coils Coil 60 83 - -
Vifa5g03215 153 CDD BIC1_CID 85 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03215 Vifa-Chr5 1066443086 1066443547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03215 - - tpra:123890389 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03215 5 1066443086 1066443547 Vifa5g03215 5 1066443086 1066443547 ECH