Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03208 ATGTATATCATCTCACATTCTCTCCCTTCATCCTCCATTTCAACACCTCCAATCTCAAATTTGCATAGAAACAACTTCATGGCAAAATGCACCACTTTCCCAATCCTCTTCCTCTTCCTTATGATCTTCCCACTACCATCACTCTCTCAAGAGAACAATTTTGTTCGACAGCCAGCTAGTCAACTCATCATCACGCCCCATCAACGCTCAAACTCAGAACCTCAACAGGTGCATGTTTCATTGGTGGGGAAAGACAAGATGAGAGTGTCGTGGATAACAGAAGACAAGGAAGCAAAATCTGTGGTGGAGTATGGGAAAAAAGCAGGGGTGTATGATGAAAAAACAATTGGTGAGAAAACCTCATGTGGAGGTTTGGGTCCGGAGTTTTCTTTCAAGACACCACCGTCCAAGTTTCCCATTGAATTTGTCATTGTTGGAGACTTGGGACAAACTGAATGGACAGCATCAACCTTAAAACATGTCGAAAAAAAAGACTACGATGTGTTCTTGTTACCAGGAGATTTATCCTATGCAGATTCACAACAACCATTATGGGATTCTTTTGGTCGTTTAGTAGAACCATATGCTAGCAAAAGACCATGGATGGTAACGGAAGGAAACCACGAAATCGAAATCTTTCCATTTATATACCCAAAAGGCTTTGAAGCTTACAACACACGTTGGCCAATGCCATTTAAAGAAAGTGGTTCAAACTCAAATCTCTACTACTCTTTTGAAGCTGTCGGAGTTCATATCATTATGTTAGGTTCATATGCCGATTTTAATGTTGATTCGGAACAATATGAATGGCTTAAACTAGACCTTGCTAAGATCGATAGAGCGAAGACACCTTGGGTTATCACATTGGTGCATGCTCCTTGGTATAATACTAATGAGGCACATCAAGGTGAAGGTGAAGCCATGAGAGAAGCTATGGAAGAGTTGCTTTATAATGCTCGGGTTGATTTGGTTTTCGCTGGACATGTTCATGCATACGAACGCTTCACTCGAATTTATGATAACAAGGTTGATTCGTGCGGTCCAATTTACGTGACAATCGGAGATGGAGGAAACCGCGAGGGACTTGCATTAAAGTTTAAGAGTCCTCCAAGTCCTCTTTCGTTGTTTCGAGAACCAAGCTTTGGTCATGGAAGGTTACGAATACTAAATGAAACTCATGCAGAATGGTCATGGCATCGCAACAACGATAAGGATGCAGTTATAGCTGATAGAATCTGGATAGAGAACTTAAGCAAGGTCCAAGATTGCTGTGATATATCAAATTCTCAACAAGTTGTTAATGAAGAGCTGTAA 1314 0.4102 MYIISHSLPSSSISTPPISNLHRNNFMAKCTTFPILFLFLMIFPLPSLSQENNFVRQPASQLIITPHQRSNSEPQQVHVSLVGKDKMRVSWITEDKEAKSVVEYGKKAGVYDEKTIGEKTSCGGLGPEFSFKTPPSKFPIEFVIVGDLGQTEWTASTLKHVEKKDYDVFLLPGDLSYADSQQPLWDSFGRLVEPYASKRPWMVTEGNHEIEIFPFIYPKGFEAYNTRWPMPFKESGSNSNLYYSFEAVGVHIIMLGSYADFNVDSEQYEWLKLDLAKIDRAKTPWVITLVHAPWYNTNEAHQGEGEAMREAMEELLYNARVDLVFAGHVHAYERFTRIYDNKVDSCGPIYVTIGDGGNREGLALKFKSPPSPLSLFREPSFGHGRLRILNETHAEWSWHRNNDKDAVIADRIWIENLSKVQDCCDISNSQQVVNEEL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03208 437 Pfam Purple acid Phosphatase, N-terminal domain 74 120 IPR015914 GO:0003993|GO:0046872
Vifa5g03208 437 SUPERFAMILY Purple acid phosphatase, N-terminal domain 65 135 IPR008963 GO:0003993|GO:0046872
Vifa5g03208 437 PANTHER ACID PHOSPHATASE RELATED 122 415 IPR039331 GO:0003993
Vifa5g03208 437 Gene3D - 73 128 - -
Vifa5g03208 437 Pfam Iron/zinc purple acid phosphatase-like protein C 347 407 IPR025733 -
Vifa5g03208 437 SUPERFAMILY Metallo-dependent phosphatases 140 404 IPR029052 -
Vifa5g03208 437 Gene3D - 136 424 IPR029052 -
Vifa5g03208 437 Pfam Calcineurin-like phosphoesterase 142 332 IPR004843 GO:0016787
Vifa5g03208 437 CDD MPP_PAPs 139 416 IPR041792 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03208 Vifa-Chr5 1062258412 1062260196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03208 173 406 Miscellaneous Gene Families AT2G03450 31.884 1.45e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03208 K22390 - gmx:100819446 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03208 5 1062258412 1062260196 Vifa5g03208 5 1062258412 1062260196 ECH