Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03196 ATGGAAGTCTCAGTCTCCGACGACGATAAAGTTATCCTCGTTTGCACTAACCGTAATCAACCAATTCAAACAACACACATCACCAACCAAGAGATTCTCCTTTCAACCACCGATATCCTCGGTTCCGATTTAACACCATTTCTCACCTTTCATACCATCAAAATTCACGCACATCGCAACAGGCTCATTGAGCAATCGTTGTATTTTCGAGGCCTTCTCAGCGGAAGCTTCAGTGAATCTTGCTTGAGCTATATCACTATCAACTGGAATCTGAATGTGTTTATGCAAATTCTTCAGCATATGTATGGCTTTCCATTGGATATTACTACTGAAAATATCCTCCCTCTTTATGAGGGTGCGCTTTATTTTGGAGTGGAGACACTTCTTTTAAAGTGTGAGACTTGGTTTTCTGAGGTATTCTCGCCAAAAGGATTTCAATTAATGGAGATACAAATGGAGGATTTGATCCAAATTTGGAAATTTAGCTTGGATCATGCAAGTGATTTCATTCTTCATTTATGTATCGGCTACCTAGCAAGAAATTTTATGTGGGCAAAACAGAACAACTTGTTTGGAAAAATTCCATATAACTTGCTGTTATCTTCAGTAAAGCACCCTCATTTGACCGTTGACAGTGAGATGCATCTTTCTGATGCACTTCTTCTTTGGCTTGAAAGTAACATGGAAAATTTGGAGAGGCAAAGTGAAGCAGAGGACAACTACAATGGGATTTTAAAACAAATTCGTGTGGACCTTTTGCCTTTGTGGTTTGCTGCAGGAAAAAGAAACTCTCTTTATTTTAGGCAGCTAGCTGAGGAAAGCCTTGATTCAATTTTCAGAGCACTGAATATTCTACCTATAGGTTCACTTGATATTTCCGGATATAGTGACTTGCAACATCTCAGGATTCGAGTTACAGAATATTCAAAGAAAATAGACCTTTCCAATTGTCCGCAATTAACATCTGCAATACTGCTTCTGTCACTCATACCTGCATCATATTTCACGGATTCCACGCAAAGGAAGATTATAGAACAGTTCTTTATTAGTTCTGGACATCCTATAAGAGAGAGTTGTGAATTCCCACAAAAACTGTTACATACCTTTATCTTTGAAGCAGTTCAGGAGGTGGATATCTCAAAGTGTCGAAGACTGCTTATTGAACACGCTGTTGATTACTTCAGCCAGTCTTTTCCTTCCTTAAAAATATTAAAAGCAGGTTATCTATTAAATATCAGGACTACCGGTTTCCTTCAGTTATTGGAGAAGTGCTCTTTGGTCAGCGAAATTGACTTGACTGTTGATATTACTCCTCTAATTCCGGCATCGGTTACAGTTTTATCCTCTAGTCCTGCTGTGATACCACTGGTACCAGAGAAGACCTCAACTCTTAAATATAAAGCAGTGGAAACCATGCCATTTCATGAATCTAGACCTCTAATTTCTTATGTTACGAAACTCACATTGGAAGGAAGAACCGATGTCAGTGATTTGAGTCTTCAATCTCATAGGCAGATAGATAAGCATTTGAATTCTGTGGCGTCTAATCTCCAATCTCTGCATATAGGTGGATGCATAGGTATTTCTGAGTTATCTCTACAAGAGCTTATGTCTCAAACACAAGTTTTGAAGAGTCTATGCCTGAGAGGAACACACCTTGTTGACCAGGCACTTTATAATTTCAAAGGCTCTTCCTTGGAGATGCTTGATGTGTCAGACACCAAGATTTCTGAAGCTGCATTAAGTTATGTTATTCATGGAAATCCAAGCTTGAAGAGTCTGAAAGCAAGAGGTTGTAAAAATTTGTTAAAAGGAGATATTTTTATTGAAAAGAGAGAATCTAGCTTTTCTTCCTTGCATGAAGAATTACATACTGAGCTAGGAAAGAAGTGTAGATTGGAAGAACTTGAGTTTGGTTGGGGTTTTTCTTCCTTCTCTTTCAGTGCATTGGAACCTGCATTAAGGTCATTAAAGACCATCAATGTAGGTTTAGGTGGAATGCTAGGGGACGATGCCCTGAGACAGCTACCAGCAATCTGTCCCCTGCTAGAAACAATAATCCTCCATTTTCAGGTTATATCTGATATCATCGTGACAAAATTAATTATCACCTTGAAGTTACAAGTATTAGCTCTGTGCTATTGTTTTGGTGATATATCCATGTCAAGCTTCAAAATCCCTATGCAAAATCTAAGAAAGCTGAGGCTTGAAAGAGTTACCCCATGGATGACCAATGATGACCTGGTTATTTTATCTCAAAACTGTAGAAATTTGGTAGAGCTTTCATTGCTTGGTTGCCCTCTTCTTAACTCAGATTCTCAACATATAATTTCATGTGCATGGCCAGGCTTGGTCTCTATTCATCTAGAGGAATGTGGAGAAATAACAGCAAACGGGGTCTCGGCTCTTCTTGACTGCAGAGCTCTTGAAGATCTTCTGTTGCGTCATAATGGTCCTGGGCTACCGAGAAACTTCATTTTTCATGCCACTTCAGAGATGCCATTGCTTCGGAAATTGTCTCTGGATATATGTGATGCAAGTGAAGGTGATTTTGACATTCCAAATTATGCAGACAGATGCTTTTTGAGTACCTTGAAGATAGCAAGATGCAAATCTCAAAGATGTGCGTTTCATCTCCCAGTCCCTTCCTCAGTGAGTCGCAGACGATCAGTGCAGGTAGAAACACTCGTGCTTGTGTGGAATAGCAAAAATCTCACCAGAACAGTGGTGAAGGAAAGACTTTAG 2745 0.3931 MEVSVSDDDKVILVCTNRNQPIQTTHITNQEILLSTTDILGSDLTPFLTFHTIKIHAHRNRLIEQSLYFRGLLSGSFSESCLSYITINWNLNVFMQILQHMYGFPLDITTENILPLYEGALYFGVETLLLKCETWFSEVFSPKGFQLMEIQMEDLIQIWKFSLDHASDFILHLCIGYLARNFMWAKQNNLFGKIPYNLLLSSVKHPHLTVDSEMHLSDALLLWLESNMENLERQSEAEDNYNGILKQIRVDLLPLWFAAGKRNSLYFRQLAEESLDSIFRALNILPIGSLDISGYSDLQHLRIRVTEYSKKIDLSNCPQLTSAILLLSLIPASYFTDSTQRKIIEQFFISSGHPIRESCEFPQKLLHTFIFEAVQEVDISKCRRLLIEHAVDYFSQSFPSLKILKAGYLLNIRTTGFLQLLEKCSLVSEIDLTVDITPLIPASVTVLSSSPAVIPLVPEKTSTLKYKAVETMPFHESRPLISYVTKLTLEGRTDVSDLSLQSHRQIDKHLNSVASNLQSLHIGGCIGISELSLQELMSQTQVLKSLCLRGTHLVDQALYNFKGSSLEMLDVSDTKISEAALSYVIHGNPSLKSLKARGCKNLLKGDIFIEKRESSFSSLHEELHTELGKKCRLEELEFGWGFSSFSFSALEPALRSLKTINVGLGGMLGDDALRQLPAICPLLETIILHFQVISDIIVTKLIITLKLQVLALCYCFGDISMSSFKIPMQNLRKLRLERVTPWMTNDDLVILSQNCRNLVELSLLGCPLLNSDSQHIISCAWPGLVSIHLEECGEITANGVSALLDCRALEDLLLRHNGPGLPRNFIFHATSEMPLLRKLSLDICDASEGDFDIPNYADRCFLSTLKIARCKSQRCAFHLPVPSSVSRRRSVQVETLVLVWNSKNLTRTVVKERL 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03196 914 Pfam BTB/POZ domain 51 134 IPR000210 GO:0005515
Vifa5g03196 914 PANTHER UNCHARACTERIZED 255 641 - -
Vifa5g03196 914 Pfam BTB And C-terminal Kelch 156 257 IPR011705 -
Vifa5g03196 914 SUPERFAMILY RNI-like 311 602 - -
Vifa5g03196 914 Gene3D - 176 283 - -
Vifa5g03196 914 Gene3D Ribonuclease Inhibitor 456 880 IPR032675 -
Vifa5g03196 914 Gene3D Potassium Channel Kv1.1; Chain A 39 169 IPR011333 -
Vifa5g03196 914 CDD BTB_POZ_ZBTB_KLHL-like 42 123 - -
Vifa5g03196 914 SUPERFAMILY RNI-like 623 846 - -
Vifa5g03196 914 SMART BTB_4 46 140 IPR000210 GO:0005515
Vifa5g03196 914 SUPERFAMILY POZ domain 50 136 IPR011333 -
Vifa5g03196 914 ProSiteProfiles BTB domain profile. 42 110 IPR000210 GO:0005515
Vifa5g03196 914 SMART LRR_CC_2 781 806 IPR006553 -
Vifa5g03196 914 SMART LRR_CC_2 728 754 IPR006553 -
Vifa5g03196 914 SMART LRR_CC_2 755 779 IPR006553 -
Vifa5g03196 914 SMART LRR_CC_2 514 539 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03196 - - gmx:100791594 1179.08