Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03145 ATGGGGGCCTCGTTGTCGAACCTTGGATCCAACGGTTCGACCATCGGTCCAAGCCTCGGCGACATCCCGGAGAATTGCGTTGCTCGTGTTTTCCTCCACCTATCTCCGCCGGAGATTTGTAACCTAGCTCGTCTCAACCGCGCTTTTCGCGGCGCCGCTTCCGCTGATTACGTCTGGGAATCTAAATTACCGTCGAACTACGAAGATCTTATCCGTTTAATCCCCCTCGAACGGTGTCGGAATTTGTCGAAGAAGGATGTTTTCGCTGCGCTCTCTCGGCCGTTGCCGTTTGATGACGGTAATAAGCAATTGTGGCTTGATAGGGTTACTGGAAGGGTTTGCATGTCGATTTCGGCGAAAGGTTTGGTGATTACTGGAATTGATGATCGGAGATACTGGACTTGGGTTCCCACTGAAGAATCTAGGTTCAATGTTGTAGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGATGGTGAGGTCGACTTTCCATTTCCTGCTGATAGTTATACTCTCTTCTTTAGACTTCACCTTGGACGATTTTCCAAAAGGCTCGGCCGGCGCGTATGCAATTATGAGCAGACCCATGGTTGGGATATAAAGCCGGTAATATTTAAGTTGTCAACTTCAGATGGTCAGCAAGCATCATCTAAGTGCTGCTTAGATGAAACTGAGAACGATGATACATATGGCAATCATAAGCGAGGATATTGGGTAGATTACAAGGTAGGCGAGTTTATTGTGAGTGGATCTAAACCCACTACTAAAGTTAGATTCTCCATGAAACAGATTGATTGTACACACTCAAAAGGTGGGCTTTGTGTAGATTCTGTATTTATCATACCTAGCGATTTGAGAGACCGCAAGGGAGGTGGCTTTTTGAAATGA 888 0.4617 MGASLSNLGSNGSTIGPSLGDIPENCVARVFLHLSPPEICNLARLNRAFRGAASADYVWESKLPSNYEDLIRLIPLERCRNLSKKDVFAALSRPLPFDDGNKQLWLDRVTGRVCMSISAKGLVITGIDDRRYWTWVPTEESRFNVVAYLQQIWWFEVDGEVDFPFPADSYTLFFRLHLGRFSKRLGRRVCNYEQTHGWDIKPVIFKLSTSDGQQASSKCCLDETENDDTYGNHKRGYWVDYKVGEFIVSGSKPTTKVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRDRKGGGFLK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03145 295 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Vifa5g03145 295 Pfam Phloem protein 2 113 282 IPR025886 -
Vifa5g03145 295 CDD F-box_AtSKIP3-like 19 64 - -
Vifa5g03145 295 PANTHER F-BOX PROTEIN PP2-A15 7 288 - -
Vifa5g03145 295 SUPERFAMILY F-box domain 17 76 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03145 Vifa-Chr5 1042103022 1042106322 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03145 - - gmx:100807328 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03145 5 1042103022 1042106322 Vifa5g03145 5 1042103022 1042106322 ECH