Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03087 ATGGCCTCAATTTCAATCCCCGCACCAGAGGCCATCCAGGTTTTACTCTCATTACTAGCTGATGATTCCTCCGCTGTTCGAGAAGCTTCCATGTCCTCTCTCGACGACCTCGCTGCACTAAATCCTGTTCTGGTTCTGGAGTGCTGTGCGACTGTTTCACGCGGTGGACGTCGGAGATTTGGAAATATGGCTGGAGTTTTTCAAGTTATGGCATTTGGAGTTCGAGCTCTTGATGAAAGAGATGTTGACTCGGTTTTTATGGGGAAGCTTGCTAAAATTGCTACTTCTGAGATGATATCTTCTAAGGAACTCAATTCCGATTGGCAACGAGCAGCAACAAGCCTACTTGTCGCGATAGGGTCGCATTTACCTGATCTTGTGATGGAAGAAATTTTTCTTCATTTATCGGGAACAAGTTCAGCATTACAGGCTATGGTTCAAATCCTTGCAGAATTTGCTTCTAGTAGTCCCTTGCTGTTCATTCCCCGCTGGAAAGGTGTACTCTCACGAATTTTGCCAATTCTTGGAAATGTGCGAGACATGCACCGGCCAACTTTTGCAAATGCATTCAAGTGTTGGTGTCAAGCTGCCTGGCAATATAGTACAGATTTTCCTTCACATTTACCGCAAGATGGTGATGTCATGTCATTTCTAAATTCTGCTTTTGAGCTTTTGTTAAGAGTTTGGGCAGTTTCACGGGACCTAAAGGTTCGTGTAGCATCCATTGAAGCACTTGGACAGATGGTTGGTCTCATAACAAGGACACAATTAAAGGCAGCCTTACCAAGGCTTGTTCCTACAATATTGGATTTGTATAAAAAGGATCTTGATATTGCTTTTCTAGCTACATGCAGTCTCCACAATCTGTTGAATGCCTCTTTACTGTCAGAAAGTGGCCCTCCTATGCTTGATTTTGAGGATTTGACTCTTACTTTAGCGACACTTCTACCCGTGGTATCTATGAATAGTGAAAGCAAAGATCAAACAGATTTCTCTGTGGGATTGAAGATGTATAATGAGGTTCAACATTGCTTTCTGACAGTTGGTTTGGTGTATCCAGATGATTTGTTTCTGTTCCTTGTAAATAAATGTAGGTTGAAGGAAGAAGCACCAACTTTTGGTGCACTTTGTGTTTTGAAACATCTTTTACCAAGGCTATCTGAAACTTGGCATAGTAAAATACCTCTACTAGTTGAATCTGTAAAGTCCTTGTTAGAAGAGCATAATTTAGGTGTTCGAAAGGCACTTTCTGAGTTAATTGTGGTTATGGCTTCACACTGTTACTTGGTTGGTTCATCTGGAGAGTTGTTCATTGAATATCTCACACGCCATTGCGCTTTGACAGATCAAAATCAGAATGATCTTGATAGTACACCAAATAAGAGAACAGAGATCAAAATTGGCGCAGTTACTCCGGGTGAGTTACGAGCAGTTTGTGAAAAAGGTCTTCTGTTGGTCACTATTACAATTCCTGAAATGGAGCATATCCTGTGGCCTTTTCTGTTGAAGATGATTATACCACAGACCTACACTGGTTCTGTTGCCATGGTTTGCAGGTGCATCTCAGAACTGTGGCGGCATAGATCTTATGGTAGTGATATGTTAAGTGAGTGTAGAGTCCGTCCTGATATTCCAACTGCCGAAGAACTTCTTGCTCGTTTTGTGGTGCTTTTACATGATCCTCTAGCAAGGGAACAATTAGCCACCCAGATTTTGACAGTCCTATGTCTTCTGGCACCTCTATTTCCGAAAAATATCAATTTGTTTTGGCAAGATGAGATTCCTAAGATGAAGGCATATGTTAGCGATACAGATGACTTGAAACAAGATCCATCATACCAAGACACTTGGGATGACATGATAATCAACTTTCTTGCAGAATCTTTGGACGTGATTCAAGATGCAGATTGGATTATGTCTCTTGGAAATGTATTTGCCAAACATTATGAACTTTATACATCTGATGATGAACATGCTGCACTTCTTCACCGATGCTTAGGGATTCTGCTTCAAAAGGTTAATGACAGAGCTTATGTCCATGATAAAATGAATTGGATGTATAAGCAATCAAACATTGCAATACCAACAAATAGGCTTGGTTTGGCAAAAGCAATGGGATTGGTTGCTGCATCTCACTTGGACACAGTGTTGGAGAAGCTGAAGGATATTATAGACAATGTTGGACAAACCATAATTCAGAGGTTATTGTCATTGTTCTCAGATGGTTACAGAACAGTAGAGTCTGATGATATACATGCTGCCTTGGCTCTAATGTATGGATATGCTGCGAAGTATGCCCCATCATCAGTTATTGAAGCCAGAATAAACGCCCTTATTGGCACCAACATGCTTTCAAGGCTTCTTCATGTGCGTCACCCTATAGCAAAGCAAGCTGTGATCACTGCAATTAATTTACTTGGTAATGCTGTCATTAATGCTTCTGAAAGTGGTGCACCATTTCCATTGAAAAGAAGGGACCAACTGCTTGATTATATTTTAACTTTAATGGGCCGAGATGATAATGATGGTTTTGCTGATTACAATGAACTCTTGCGTACTCAGGCTCTTGCATTAAGTGCCTGCACTACATTGGTTTCCGTGGAGCCAAAGCTAACGGTTGAAACCAGAAACTATGTGATGAAGGCCACATTAGGATTTTTTGCGATACAAAATGATCCAGTTGAAGTTGTCAGTCCCCTTGTTGACAATCTGATCTCTCTTTTATGTGCAATTCTTCTCACTGGTGGAGAGGATGGAAGAAGTCGAGCAGAGCTGCTAATGCTTATCCTGAGGCAAATTGATCAATTTGTCTCTTCACCTGTTGAATATCAGAGGAGAAGAGGATGTCTTGCAGTCCATGAGATGCTTCTCAAATTTCGGATGGTTTGTGTTAGTGGCTATTGCGCACTGGGATGCCATGGGAATTGTGCACATACCAAGCAAGTTGACCGTACTCTTTATGGGAATTTTTCTAATCTACCATCTGCATTTGTATTGCCAAGTCGTGAAGCTTTGTGCCTGGGAGATAGGGTAGCAATTTATCTTCCACGTTGTGCCGACACAAATTCTGAAGTCCGAAAAATATCAGCACAAATTCTTGATCAACTCTTCAGTATTTCTCTTTCACTTCCAAAGCCTCCTGGTTTGTCTATATCTGCTGAAGACATAGAATTGTCATACCGTGCTTTGTCTTCTCTTGAAGATGTGATAGCCATGCTGAGAAATGATACATCTATTGATCCATCAGAAGTTTTCAACAGAATCATTTCCTCCCTGTGCATTCTCTTGACCAAGGATGAGCTGGTTGCTATGCTTCATGGTTGCTCAGTAGCTATATGTGATAAGATCAAGCAGTCTGCCGAAGGAGCCATTCAAGCTGTTGTTGAGTTTGTTACAAGGAGAGGGAGTGAACTGACAGAGATTGATATCTCAAGGACAACACAATCATTGATCTCTGCCACTGTGCATGCAACTGATAAGCATTTACGCGTGGAAACTCTTGGCGCTATTGCCTCTTTGGCCGAAAATACTAGTTCAAAAACTGTTTTTGATGAAGTCCTGGCCGCTGCTGGAAAGGATATAATAACGAAGGATATATCTAGGCTGCGTGGTGGATGGCCCATGCAGGATGCATTCTACGCCTTTTCACAGCACATGGTTTTATCAGTGTTATTTCTAGAACATGTGATGTCTGTCCTTAGCCAGATTCCTATCCTTAAATGTGATGTAGACAGAGTTGAGGATAGCCAGGTCCAGAATCATACAGAAGACGGCCAACTGGAAGCTGCAATTTTTGCTCTTACTGCTTTTTTCAGAGGTGGAGGAAAAGTTGGAAAAAGGGCTGTTGAGCAAAACTACGCTTCTGTTCTTTCTGAGCTGATGCTGCAACTTGGAAGCTGTCATGGGTTAGCTTCCTCTGGTCACCTTGAACCATTGAGGAATCTTCTGACTGCATTCCAGGCATTCTGCGAATGTGTTGGTGACCTTGAGATGGGAAAGATTTTAGCCAGAGATGGGGAACTTTCTGAAAATGAGAGGTGGATTAATCTCATTGGAGACATAGCCGGATGCATATCTATAAAGAGGCCGAAAGAGATCCAAAATATTTGCCAATTTTTTAAAAGATCGTTGGATCGACCCCAGAAATACCAAAGGGAAGCCGCTGCTGCTGCCTTGTCAGAATTTGTTCGTTATAGCGGTGGACTTGGTTCGCTTTTGGAGAAAATGGTTGATGTTTTATGCAGACGGGTATCAGACGAGTCTTCTACTGTTCGACGCTTTTGTTTGAGAGGATTAGTACAGATCCCATCAATTCATATTCTGAAGTATACAGCTCAAGTCCTGGGTGTTATATTAGCTCTGCTAGATGATTCTGATGAATCTGTACAATTAACTGCAGTATCATGCTTACTTATGATTCTTGAATCTTCACCTGATGATGCAGTTGAGCCTATTTTGCTCAATCTTTCAATACGGCTTCGAAATCTACAAACAAGCATGAATGCAAATATGCGAGCCAGTTCCTTTTCAGCATTTGGGGCACTAAGCAACTATGGAGTAGGGGCACTAAGAGAGGCATTTGTTGAGCAGGTACATGCAGCTATTCCTCGTCTGGTTTTGCATCAGTTTGATGAAGATGTTAGTGTCCGACTAGCCTGCCGGAGTACCCTGAGACGAGTTTTCACATTGATAGAAATTGAAGGATTGCTTGCCCTGCTAAACACACCGAGTTTCCTTTCTGATCATCGAAGTGACTATGAGGACTTTCTACGAGATATTGCAAAACAATTTACGCAGCATCTTCTTTCCAGAGTTGATTCTTACATGGCGTCAACAGTGCAGGCTTTTGATGCACCATGGTCCATAATTCAGGCAAATGCTATGTACTTGTGTAGTAGCATGCTCTCTCTATCGGATAATCAGCATATTTTAGCTGACTACCATACACAGGTATTTGGTATGCTGGTTGGGAAAATGAGTCGATCACCTGATGCTGTTGTAAGGGCAACATGTTCTTCTGCTTTGGGCTTGTTGCTCAAATCTTCCAACTCATGTTCATGGAGAACAGATCATCTTGATCGATTAGAATTGACAAAAAGTAACCATGATGCGGCGGAGTCCCAAGATAAACTAGCAACAACTCAATAA 5148 0.4176 MASISIPAPEAIQVLLSLLADDSSAVREASMSSLDDLAALNPVLVLECCATVSRGGRRRFGNMAGVFQVMAFGVRALDERDVDSVFMGKLAKIATSEMISSKELNSDWQRAATSLLVAIGSHLPDLVMEEIFLHLSGTSSALQAMVQILAEFASSSPLLFIPRWKGVLSRILPILGNVRDMHRPTFANAFKCWCQAAWQYSTDFPSHLPQDGDVMSFLNSAFELLLRVWAVSRDLKVRVASIEALGQMVGLITRTQLKAALPRLVPTILDLYKKDLDIAFLATCSLHNLLNASLLSESGPPMLDFEDLTLTLATLLPVVSMNSESKDQTDFSVGLKMYNEVQHCFLTVGLVYPDDLFLFLVNKCRLKEEAPTFGALCVLKHLLPRLSETWHSKIPLLVESVKSLLEEHNLGVRKALSELIVVMASHCYLVGSSGELFIEYLTRHCALTDQNQNDLDSTPNKRTEIKIGAVTPGELRAVCEKGLLLVTITIPEMEHILWPFLLKMIIPQTYTGSVAMVCRCISELWRHRSYGSDMLSECRVRPDIPTAEELLARFVVLLHDPLAREQLATQILTVLCLLAPLFPKNINLFWQDEIPKMKAYVSDTDDLKQDPSYQDTWDDMIINFLAESLDVIQDADWIMSLGNVFAKHYELYTSDDEHAALLHRCLGILLQKVNDRAYVHDKMNWMYKQSNIAIPTNRLGLAKAMGLVAASHLDTVLEKLKDIIDNVGQTIIQRLLSLFSDGYRTVESDDIHAALALMYGYAAKYAPSSVIEARINALIGTNMLSRLLHVRHPIAKQAVITAINLLGNAVINASESGAPFPLKRRDQLLDYILTLMGRDDNDGFADYNELLRTQALALSACTTLVSVEPKLTVETRNYVMKATLGFFAIQNDPVEVVSPLVDNLISLLCAILLTGGEDGRSRAELLMLILRQIDQFVSSPVEYQRRRGCLAVHEMLLKFRMVCVSGYCALGCHGNCAHTKQVDRTLYGNFSNLPSAFVLPSREALCLGDRVAIYLPRCADTNSEVRKISAQILDQLFSISLSLPKPPGLSISAEDIELSYRALSSLEDVIAMLRNDTSIDPSEVFNRIISSLCILLTKDELVAMLHGCSVAICDKIKQSAEGAIQAVVEFVTRRGSELTEIDISRTTQSLISATVHATDKHLRVETLGAIASLAENTSSKTVFDEVLAAAGKDIITKDISRLRGGWPMQDAFYAFSQHMVLSVLFLEHVMSVLSQIPILKCDVDRVEDSQVQNHTEDGQLEAAIFALTAFFRGGGKVGKRAVEQNYASVLSELMLQLGSCHGLASSGHLEPLRNLLTAFQAFCECVGDLEMGKILARDGELSENERWINLIGDIAGCISIKRPKEIQNICQFFKRSLDRPQKYQREAAAAALSEFVRYSGGLGSLLEKMVDVLCRRVSDESSTVRRFCLRGLVQIPSIHILKYTAQVLGVILALLDDSDESVQLTAVSCLLMILESSPDDAVEPILLNLSIRLRNLQTSMNANMRASSFSAFGALSNYGVGALREAFVEQVHAAIPRLVLHQFDEDVSVRLACRSTLRRVFTLIEIEGLLALLNTPSFLSDHRSDYEDFLRDIAKQFTQHLLSRVDSYMASTVQAFDAPWSIIQANAMYLCSSMLSLSDNQHILADYHTQVFGMLVGKMSRSPDAVVRATCSSALGLLLKSSNSCSWRTDHLDRLELTKSNHDAAESQDKLATTQ 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03087 1715 Gene3D - 1361 1683 IPR011989 -
Vifa5g03087 1715 Gene3D - 12 271 IPR011989 -
Vifa5g03087 1715 SUPERFAMILY ARM repeat 9 915 IPR016024 -
Vifa5g03087 1715 SUPERFAMILY ARM repeat 800 1685 IPR016024 -
Vifa5g03087 1715 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 51 1688 IPR045206 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03087 Vifa-Chr5 1021286398 1021331556 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03087 K24816 - gmx:100800961 2947.92