Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03086 ATGGCAAAGAAAAAGATGAAGACGCCGATTGATCGTGTTCCCAGACATTCTCAACAGCCTAGAAGTTCGCCCCCTAAACGCCGCACTGATTTCTCGTTTTTCAATCGGGCTCCTCCTTCTTTTTCCAACTTTGCTATTGATTCCTCGCCTGGTTCATCTTCTGACGAAGTGAGATTGTCCAATGTCACTGCAAGCAGTTCACTAGAGAGAAGAATGATGGTTAAACAATTTTATAAAGAAGCACTGGTTCGATGCAGCAAGTACCAAGAGGGTAGACCCGTATGTTCATCTGAGTCTTTTGATGTTTCAGTTGCAGAATTGGATTCAGTTGACCTTTGCGGCAATAGGGATGCTTGTATTAAGACGTCAGAATCTACACCTCGGGAATCATCTGTAAGTGATAATTGTTCTCCTGCTGTAACCCCTGGAAATGTCGTATGGGCAAGAACTACTTGTAAAATGTGGTGGCCTGCTGAGGTCATGGAAGAAAAATGTGCATTAACTGACTGTGTTAGTGATGGACATGTTTTAGTGCAGTTTTATGGAAATTATCCCAGTGCTTGGATTGATCCAGCGACAGATGTTTCAATTTTTGAGGATTCTTTTGAAGAAAGGAGCAATAACCCGTCGAATGATTTTCAAGTTGCTCTAAAGCAAGCCCTGCAAAGGAAGACACAACTTAGTTCTTGCCAAAATTTGAGTCCCGATAGGTCTACTCACTCTACTCAGCATGATCGTTCAGCTGGTAAATATACATCGCCTAGCTCAAGCAGAACTATCAACGAATTTCAAGAGAGACGTAGGGGAAAAAGAGAACGTAAACCCAAAGTTCATTTTGATGAGGTCATATATCCAATGAAATCAGAAAAGAAGGACCGTCGGTTAAAGATAATGCGGTACCTTGGTCTTGCACCTCCAGTTGGGTTCTCCTTTTTGAACATGCTTACGAGTGAAGTAATGAATATTTCAAAAAGAGTGTCATCAACACACGTAAGTTGA 999 0.4174 MAKKKMKTPIDRVPRHSQQPRSSPPKRRTDFSFFNRAPPSFSNFAIDSSPGSSSDEVRLSNVTASSSLERRMMVKQFYKEALVRCSKYQEGRPVCSSESFDVSVAELDSVDLCGNRDACIKTSESTPRESSVSDNCSPAVTPGNVVWARTTCKMWWPAEVMEEKCALTDCVSDGHVLVQFYGNYPSAWIDPATDVSIFEDSFEERSNNPSNDFQVALKQALQRKTQLSSCQNLSPDRSTHSTQHDRSAGKYTSPSSSRTINEFQERRRGKRERKPKVHFDEVIYPMKSEKKDRRLKIMRYLGLAPPVGFSFLNMLTSEVMNISKRVSSTHVS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03086 332 SUPERFAMILY Tudor/PWWP/MBT 137 232 - -
Vifa5g03086 332 MobiDBLite consensus disorder prediction 1 36 - -
Vifa5g03086 332 MobiDBLite consensus disorder prediction 228 274 - -
Vifa5g03086 332 CDD PWWP 143 221 - -
Vifa5g03086 332 MobiDBLite consensus disorder prediction 15 36 - -
Vifa5g03086 332 Pfam PWWP domain 143 222 IPR000313 -
Vifa5g03086 332 Gene3D - 130 233 - -
Vifa5g03086 332 MobiDBLite consensus disorder prediction 245 260 - -
Vifa5g03086 332 PANTHER PWWP DOMAIN-CONTAINING PROTEIN 32 299 - -
Vifa5g03086 332 ProSiteProfiles PWWP domain profile. 142 200 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03086 Vifa-Chr5 1021217103 1021223199 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03086 - - gmx:100801494 410.609