Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03017 ATGGTTTTATATGAGCATTCAGATGTTTATCAGTGGGGTCTTAATCTTCTTGACGGTGACCCTGGTTATAATCTGAATTACTATGATAACATAGTTCAACATGATAATGGTGACATCTATAATGGACACTACTTCCATAGTAATTACGATAACGAATGTAGTAACCATGTAGAGAATGATGAGATCATTGCCCGTGCTCTTCAACAAGAGTTTTCACAGCTAGAGATTGCGGAGTCTTCAAGGTATATACAGACAGATGAAAATCACTTTCATCATGTTAATGAGGCCGAGCCAGCATATGATTGGCATGATTCTTCAATGGTTAATTATTGTTCAGAAGGCCATGATTATGCCCAAGAAGGAGTTGGTGATGTAGAAAGTTCATGTTCTAGTCCTCCTGAAACAGAGGAGTATTCTTTGGAGATAACTGACAATTATCCACTTGACGATGAAGTAGGGAAGAGATTAAGCCAAATGATACCTATTCCGCATGTTCCGAAAATTAATGGAGAAATTCCTTCAATCGATGAAGCTACATCTGATCATCAAAGGCTTCTGGATAGATTGCAATTATACGACTTTGTGGAGAACAAGGTGCACGGTGATGGCAATTGCCAGTTCCGTGCACTCTCAGATCAACTGTATCATGCCCCCGAGCGCCACAAGTTTGTGAGGAGACAAGTTGTCAGCCAGCTCAAATCTAATCCGGAGATTTATGATGGATATGTTCCCATGGAATATGGTGACTATTTGGACAAGATGTCAAAGAGTGGAGAATGGGGAGATCATGTCACTCTCCAAGCTGCTGCCGATTCGTATGGTGTGAGAATATTTGTCATGACTTCTTTCAAAGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAAGCCAACAGGAGTGATTTTTCTGAGTTTTTGGGCAGAGGTGCATTACAATTCCATCTACCCTCAAGGAGATATACTTTCAGACGAGTCGAGAAAAAAGAAAAGATGGTGGAATTTTGGGAGCAAGAATTAG 1020 0.4039 MVLYEHSDVYQWGLNLLDGDPGYNLNYYDNIVQHDNGDIYNGHYFHSNYDNECSNHVENDEIIARALQQEFSQLEIAESSRYIQTDENHFHHVNEAEPAYDWHDSSMVNYCSEGHDYAQEGVGDVESSCSSPPETEEYSLEITDNYPLDDEVGKRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVENKVHGDGNCQFRALSDQLYHAPERHKFVRRQVVSQLKSNPEIYDGYVPMEYGDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPTGVIFLSFWAEVHYNSIYPQGDILSDESRKKKRWWNFGSKN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03017 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Vifa5g03017 339 Pfam OTU-like cysteine protease 201 286 IPR003323 -
Vifa5g03017 339 FunFam OTU domain-containing protein 176 322 - -
Vifa5g03017 339 CDD OTU_plant_OTU9-like 185 316 - -
Vifa5g03017 339 Gene3D - 175 322 - -
Vifa5g03017 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Vifa5g03017 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 55 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03017 Vifa-Chr5 993731890 993735088 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03017 - - aip:107648617 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03017 5 993731890 993735088 Vifa5g03017 5 993731890 993735088 ECH