Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03013 ATGCAATTTATGAAACCGTGGTTTCGTAACGGTAGCTTCTGCCACAACCGTTTCGGCGAGTTCAGAACTCAACTCGAAGAATCCGGAACCGTGCGCGACCAAATTCGAACCGTCGTTACACAAATGAGTCCACCCACAAGACTCATGTATGCTAACATTCTTCTTGTTCATCACTCTCGCCCTACTCCAGAACTTTTGGAGAAGGCTAAGTCTCAGATTGATGTTCTGAAGGACAAGTACAAGCAACTTGCTGATATTCTTGGAGGATGTACTGGTCAATACTATAGGTATCATGGTGATTGGAAGAGTGAGACACAGTCTGTTGTTTCTATGCTTACTTTTATGCACTGGCTTGAAACAGGAAACGCTTCTCGAACACAAAGAAGCCGAGGAAAAACTCGGCCTGTTAATCTGCACTTTTCTGTAAGGATAAAGGATGTCTTCCACTATTTGATAGTAATTTCAAATCAAGCGAGTGGCTTCTTTTATCAATTATTGAATGGTCCGGACGAGTTTAATCTAGATGTTGAAGACTACCTAGTTGGTGTTTGTTTCATGTCTAATGAATTGCCAAGGTATGTGGTTAATCAAGTAACATCTGATCTTCATGCTGCATTCCGAATGCTCAATCTACGAAATGATTTTCTGCGTAAGAAGTTTGATGGCATGAAGTATGACCTAAGAAAAGTAGAGGAAGTTTACTATGATGTTAAGATTAGGGGTTTGACACCCAATGGTGAGTCTATGAAGGAGTCAAAGAACAATCTTAGTATGTTAGAATGTATTGTATAA 792 0.4015 MQFMKPWFRNGSFCHNRFGEFRTQLEESGTVRDQIRTVVTQMSPPTRLMYANILLVHHSRPTPELLEKAKSQIDVLKDKYKQLADILGGCTGQYYRYHGDWKSETQSVVSMLTFMHWLETGNASRTQRSRGKTRPVNLHFSVRIKDVFHYLIVISNQASGFFYQLLNGPDEFNLDVEDYLVGVCFMSNELPRYVVNQVTSDLHAAFRMLNLRNDFLRKKFDGMKYDLRKVEEVYYDVKIRGLTPNGESMKESKNNLSMLECIV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03013 263 FunFam Translin 11 128 - -
Vifa5g03013 263 Gene3D Translin; domain 2 200 253 IPR016069 GO:0043565
Vifa5g03013 263 CDD Translin 21 241 IPR033956 GO:0003697|GO:0003723|GO:0016070
Vifa5g03013 263 Pfam Translin family 32 241 IPR002848 GO:0043565
Vifa5g03013 263 Coils Coil 66 86 - -
Vifa5g03013 263 PANTHER TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X 13 252 IPR002848 GO:0043565
Vifa5g03013 263 Gene3D Translin; domain 1 8 151 IPR016068 GO:0043565
Vifa5g03013 263 Gene3D Immunoglobulin FC, subunit C 172 199 - -
Vifa5g03013 263 SUPERFAMILY Translin 14 242 IPR036081 GO:0043565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03013 - - gmx:100811968 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03013 5 992879153 992881895 Vifa5g03013 5 992879153 992881895 ECH