Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02984 ATGGACATTCAGCATTCAAAATTCAAAAGAATCTGTGTTTTTTGTGGTAGTAGTCCTGGCAAAAAAACTAGCTACCAAGATGCTGCCATTCAACTTGGACAAGAATTGGTTTCAAGGAACATTGATCTTGTTTATGGAGGTGGAAGCATTGGACTAATGGGTTTGGTTTCTCAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGAGTTATTCCCAAGACACTCATGCCTAGAGAGCTTACTGGTGAAACAGTAGGAGAAGTAAAAGCTGTGGCTGATATGCATCAAAGGAAAGCTGAAATGGCTAAACATTCAGATGCTTTCATTGCTTTACCAGGTGGATATGGTACTCTAGAAGAGCTTACTTGA 369 0.4065 MDIQHSKFKRICVFCGSSPGKKTSYQDAAIQLGQELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELT 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02984 122 SUPERFAMILY MCP/YpsA-like 5 121 - -
Vifa5g02984 122 PANTHER LOG FAMILY PROTEIN YJL055W 3 121 - -
Vifa5g02984 122 Gene3D - 2 122 - -
Vifa5g02984 122 NCBIfam Rossman fold protein, TIGR00730 family 9 121 IPR005269 GO:0009691|GO:0016787
Vifa5g02984 122 Pfam Possible lysine decarboxylase 53 121 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02984 Vifa-Chr5 984846527 984848658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02984 K22522 - gmx:100810030 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02984 5 984846527 984848658 Vifa5g02984 5 984846527 984848658 ECH