Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02977 ATGGCTTCTTCTAGGAAGAGTTTTCTTTCCAGATCAAGTTACATTTTTCCAACAACCTCAGAGATAGAGACAAGTTTCAATACAAAATCATCAGAAGCAACTGAGTTCGAGCTCGATGAAGCCGATGTATGGAACATGTCGTATTCAAATTCAAATTCCAACAACATAACAGAATCAAAGAAGTATGTACTACCAGGTTTGAAGAGAGGTTCTAGAAAAATGGAATCCAACAATAGAGTTAACCCTATAGCTTCATCTTCTTTACCGATGAATATACCGGATTGGTCAAAGATCTTGAAGGATGAATACAAGAAGAAGAACAAAGAGAATAGTGACGATGATGAAGATGGTTATGATCGAGAAACTCGTTTACCTCCTCATGAGTATCTTGCAAGAACTAGAGGAGCTTCTCTTTCTGTTCATGAAGGGAAAGGTAGGACTTTGAAAGGTAGGGATTTGCGTAGTGTTAGGAATGCTATTTGGAAGAAAGTTGGTTTCGAAGATTAA 507 0.3748 MASSRKSFLSRSSYIFPTTSEIETSFNTKSSEATEFELDEADVWNMSYSNSNSNNITESKKYVLPGLKRGSRKMESNNRVNPIASSSLPMNIPDWSKILKDEYKKKNKENSDDDEDGYDRETRLPPHEYLARTRGASLSVHEGKGRTLKGRDLRSVRNAIWKKVGFED 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02977 168 Coils Coil 168 168 - -
Vifa5g02977 168 Pfam Senescence regulator 67 168 IPR007608 -
Vifa5g02977 168 MobiDBLite consensus disorder prediction 103 128 - -
Vifa5g02977 168 PANTHER EMB|CAB72159.1 1 168 - -
Vifa5g02977 168 MobiDBLite consensus disorder prediction 103 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02977 Vifa-Chr5 982839428 982839934 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02977 - - vra:106757485 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02977 5 982839428 982839934 Vifa5g02977 5 982839428 982839934 ECH
Vifa5g02977 5 982839428 982839934 Vifa3g01095 3 284427000 284427494 PCT