Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02844 ATGGCTTCTGCAATTAGTCATAGCGATGAAGAAACTCCGTTGGTTGTCGCCGATGAACCACCGCTTCGAGTTGAACCACACAAAAGCCACAGCAGAGATGTTCATATTTTGAGCTTAGCGTTTTTATTGATCTTTCTTGCTTATGGAGCTGCTCAAAATTTACAGAGCACTCTCAACACTGAGGAGGATTTGGGTACGACTTCGCTTGGGATACTTTATTTGTCGTTTACGTTTTTTTCTCTGTTTGCTTCTTTGGTGGTTCGGATTCTCGGATCTAAGAATGCTTTGATTATTGGAACTTCCGGTTATTGCCTCTACGTCGCTGCCAATTTGAACCCCAATTGGTATACACTGGTTCCGGCTTCTGTGTATCTTGGGTTTTGTGCTTCTATAATATGGGTTGGACAGGGAACTTATCTGACTTCCACTGCACGCACTCATGCTATAGATAACAATTTCCACCAAGGTACAGTCATTGGTGACTTCAATGGCGAATTCTGGGGTGTCTATGCGCTTCATCAGTTTATTGGAAATCTTATTACATTTGCTCTACTCAGTGATGGGCAAGGGGGAAGTACCAAAGGCACAACTTTGTTGTTTGTTGTATTCCTTTTCGTTATGAGCTTTGGTGCAATACTAATGTGCTTCCTACATAAACGGAGTGGTAATAGTAAGGAAGGATACGAGCATTCAGAAGCTGATGCTGGTGAATCAAAGTCCCTTAAGTCTCTATGTAGATCACTCACAAGTGCATTGTCGGATGCGAAGATGTTGTTGATCATACCCCTTATGGCATATTCAGGTCTACAACAAGCATTTGTTTGGGCGGAATTTACCAAGTACGTTGTAACTCCGGCAATTGGTGTCTCCGGTGTTGGTATTGCAATGGCAGCATATGGAGCTTTTGATGGAATATGTTCTCTGGCCGCTGGTCGTCTCACCTCTGGTCTCACATCCATTACATCAATAGTTTCTTTTGGAGCTTTTGCTCAGGCGGTTGTACTAATATTACTACTGCTAAATTTCAGCATATCTAGCGGATTTCTCGGAATGCTATTTAAGCATGACATGGAAGGGGCTTTTGCACAGCTAAAGATATGGCAAAGCGCTACGATTGCTATCGTGTTCTTTGTGGCCCCATACATTTCATTCCAAGCAGTTATCATAGTCATGTTGGTTCTATTATGTTTGTCATTCTGCAGTTTTCTATGGTTGGCTCTTAAGCTGGGGAATGCATCATCACCCTCCACCAGTGACTGA 1260 0.4278 MASAISHSDEETPLVVADEPPLRVEPHKSHSRDVHILSLAFLLIFLAYGAAQNLQSTLNTEEDLGTTSLGILYLSFTFFSLFASLVVRILGSKNALIIGTSGYCLYVAANLNPNWYTLVPASVYLGFCASIIWVGQGTYLTSTARTHAIDNNFHQGTVIGDFNGEFWGVYALHQFIGNLITFALLSDGQGGSTKGTTLLFVVFLFVMSFGAILMCFLHKRSGNSKEGYEHSEADAGESKSLKSLCRSLTSALSDAKMLLIIPLMAYSGLQQAFVWAEFTKYVVTPAIGVSGVGIAMAAYGAFDGICSLAAGRLTSGLTSITSIVSFGAFAQAVVLILLLLNFSISSGFLGMLFKHDMEGAFAQLKIWQSATIAIVFFVAPYISFQAVIIVMLVLLCLSFCSFLWLALKLGNASSPSTSD 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02844 419 Pfam Ion channel regulatory protein UNC-93 64 345 IPR010291 -
Vifa5g02844 419 CDD MFS_unc93_like 34 408 IPR044771 GO:0055075
Vifa5g02844 419 Gene3D MFS general substrate transporter like domains 29 231 IPR036259 -
Vifa5g02844 419 PANTHER UNC-93 RELATED 348 411 - -
Vifa5g02844 419 SUPERFAMILY MFS general substrate transporter 18 406 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02844 Vifa-Chr5 941366026 941368419 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02844 - - gmx:100802740 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02844 5 941366026 941368419 Vifa5g02844 5 941366026 941368419 ECH