Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02826 ATGTCATCAACAACATCAACAATCGCAAAAACAAGATCAGAGTTGTTCCGAACTCGTCTTGGTTCTGCTCTAAGAACAACCTTAGCATGCAGCATAGTTGGTATCACTGCCTTATATAGCCCTGAACATGTTATGATTTTCTCTCTACTTAGCCTTCAAGTTATAAGACCTGGTCACTTCAGCGACTGCATGGCTGCGCTGGCTGTGGCGGTTGGCACGTTTGTGGTGGCGCTACCGGTATCGACGAACTTGTTGACTAAAAGGATAGCTTTTGGACAGCTTGTGATTATTTATGTGAGCACAGTTATACATGGTGCGGAAGAAGGAGTGGCTACACATTCAATTCATGTGGCTTGTTCTACTGCACTTGGTGCTATAGCTTCTGTTCTGGCCATGTTGCTACCTTATCCAAGAGTTGCTTACTATGAGGCTAAGAAGTTCTACCAATTATACACTGAGAATACATCTGAGAGATTAAACTGCAGTATAGAGACTATCTCTGCCTCAGACAACTCAACTGCTGTTGGTTTTAGAACTCGGGCCAAGTACCTCTCCGCGACAGGAGCCAAGCTTCTCCATTGTGTCACAACTACACTGGATGGCATGTATTGGGAACGACCTCAAACAATAATTTCCAACTCTCGTATTGACCTGGAAGAGAAACTGCAAGACTTGGATATACCGATAAGAGGGATGGACATTGCCCTATCGAGCGGCATGTCTTTTCCTGTTGGTGTTATAGATGAAGAGCTCAGAGGTGTTGTGCTCAATAGCAGACAAAAAATCAGCCAAAAACTAGATCAGCAAGCTAAGTGCTTTGCTCCTTTTGATGCAACCACAGATCAAGAAATGAAACTGGGCATTTTCAACAAATACCTATCCATAGCCTGCAAAGATCTTCCAACTTCATTCTTTTTATACTGTGTGCAACTTCTCCTAGATGATGTGTCTATTTCAAAGAAAACCGACCATGCGCTGAAGAAAGCTCAAAAAAGTGGTGATTGTCAGTGGTGCTTCAACAAGATCCGTGAGCTTTTGATGAACTTGATTCCCAGCAACAAAGGCTTGATCTTTGCATTAAAGTCCTCTCTGTCATTAGGCCTTGCTGTGTTACTCGGTTTGATGTATGACAGGAATAATGCATATTGGTCAGGGCTCACAATTGCAATCAGTTACGTGACTGGACGACAGCCGACATTCTCAGTTGCAAATGCACGAGGACAAGGAACAGCTTTTGGATCAATCTATGGGATCATATGTAGCTTCATTTTCCAAAAATGTGTAGGAATTGTGGATTTAAGATTCTTAGCTCTTATACCGTGGGTCATTTTCGCTTCTTTTCTAAGGCATAGTAAAATGTATGGCCAATCTGGGGCAATTTCAGCAGTTTTAGGGGCCTTGTTGATCCTTGGTAGGAAGAACTATAGTACTCCGCCTGAATTTGGAATTGCTAGAATGGCCGAGGCTACAATAGGACTCGCTTGCCTTATCGTCGTAGAGATTATATTAAGTCCATCGAGAGCTGCAACTCTAGCAAAATCAGAACTTTATCAAACCTTGAGAACACTTCAGGACTGCATCAAGCAGATTGCCATGATTACCCCTAGCGAAAAAGAGATTCCATCTTCAAGTTACCAAACCCTGAGAGAAGAGCAGAAGAAGCTCAAATCTCTTGTGCGTAGATTAGGAGAATTTACAGCAGAAGCTGAGTTGGAGCCAAGCTTTTGGTTCCTTCCATTTAATAATGCCTGCTACAACAATATGCTGAAATCTCTATCAAGGATGGTAGATCTCTTGCTTTTTGTGGCTTACTCAATGGAGCATGTCACGCAATTGGCACAGAAAGATGGAGTAATTTGGATGGACATTCAAGGTCGAGGGAATGAGAATGTGAAGATTTTTAGGGACAGAGTTGACCCAATATTGAAAAGCCTGGAAGAGATAACAAGGATGAAGTCTATTAAGAAAATTGAAAGTGACTTGAAGAGCCAAAATGTTCCTCACGATCTCGAGTCACAAGAATATCTCAATGCAGACGCATTAAGGATCTTGAGCAGAGATGAAGAGGTTGATAGCATTACAAACTCTTTCCTCCAACATCTAGAGGAAATTGCTGACAAAACTCATACCAACAAAGATGAGGAGACACTTAAAGTTCAGATGCTTTTTCATTACAGCTGCTTGGGATTCTGCACCAGTAGCTTGATGAGGGAAATAGTGAAGATTGAGAGTGAAATAAGCGAGCTGTGTATGTGGGAGAACCCTTCAAGTGAAACAAACTTCAAATAG 2289 0.4207 MSSTTSTIAKTRSELFRTRLGSALRTTLACSIVGITALYSPEHVMIFSLLSLQVIRPGHFSDCMAALAVAVGTFVVALPVSTNLLTKRIAFGQLVIIYVSTVIHGAEEGVATHSIHVACSTALGAIASVLAMLLPYPRVAYYEAKKFYQLYTENTSERLNCSIETISASDNSTAVGFRTRAKYLSATGAKLLHCVTTTLDGMYWERPQTIISNSRIDLEEKLQDLDIPIRGMDIALSSGMSFPVGVIDEELRGVVLNSRQKISQKLDQQAKCFAPFDATTDQEMKLGIFNKYLSIACKDLPTSFFLYCVQLLLDDVSISKKTDHALKKAQKSGDCQWCFNKIRELLMNLIPSNKGLIFALKSSLSLGLAVLLGLMYDRNNAYWSGLTIAISYVTGRQPTFSVANARGQGTAFGSIYGIICSFIFQKCVGIVDLRFLALIPWVIFASFLRHSKMYGQSGAISAVLGALLILGRKNYSTPPEFGIARMAEATIGLACLIVVEIILSPSRAATLAKSELYQTLRTLQDCIKQIAMITPSEKEIPSSSYQTLREEQKKLKSLVRRLGEFTAEAELEPSFWFLPFNNACYNNMLKSLSRMVDLLLFVAYSMEHVTQLAQKDGVIWMDIQGRGNENVKIFRDRVDPILKSLEEITRMKSIKKIESDLKSQNVPHDLESQEYLNADALRILSRDEEVDSITNSFLQHLEEIADKTHTNKDEETLKVQMLFHYSCLGFCTSSLMREIVKIESEISELCMWENPSSETNFK 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02826 762 Pfam Fusaric acid resistance protein-like 368 499 - -
Vifa5g02826 762 Coils Coil 548 568 - -
Vifa5g02826 762 PANTHER P-HYDROXYBENZOIC ACID EFFLUX PUMP SUBUNIT-RELATED 12 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02826 Vifa-Chr5 936975139 936979025 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02826 - - aprc:113863134 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02826 5 936975139 936979025 Vifa5g02826 5 936975139 936979025 ECH