Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02742 ATGAAGTTTGAGAGTGTAGCTGTGACCGCTGCTATTGAAAAATGCTTTGCCATGGAATTTTCTGGTCACTACACACAAGTTCGCTGCTATACCCATACTCAAGATGCTGTGAAGGATGCGGATGAAAAACAGGGTAAATATTATGCTCGTAAGGCAGTGTCGTTTGTTTTGATTACTATTACAGGCGGTGTTGCTCTGAGTGCTCTTGACGACCTTTCTATCTATCATGGTTGTAGCAGCAAGGCCATGGAGGATGCAAGCAAGAACCAGGCAATAATAGATGCCATTGGAGAACCAATTATTAAAGGTTCATGGTACAATGCATCTCTTGCAGTGGCTCACAAGAGGCAATCTGTATCTTGTTCATTTCCCGTTTCTGGACCCCTAGGCTCAGGTGTCTTACAGCTGAAGGCAGTCCGCAATGGAGATGACTCTTGGTCTTCTTTTTTTCTTCCTCGTGATTGGGAAATTTTAGTCATGGACGCTCTCCTCCATGTACCTGGGAACGAGGAGAAGCATCAGACATTACGGATTAATCTCTCACCCAAGCTGTCTCCTTCTATTGCTTGCACCGACTGCGTAGCTTGTCCATCCGATAGATCACAGGCGAAGTTGAGTTCCAATCAATAA 630 0.4492 MKFESVAVTAAIEKCFAMEFSGHYTQVRCYTHTQDAVKDADEKQGKYYARKAVSFVLITITGGVALSALDDLSIYHGCSSKAMEDASKNQAIIDAIGEPIIKGSWYNASLAVAHKRQSVSCSFPVSGPLGSGVLQLKAVRNGDDSWSSFFLPRDWEILVMDALLHVPGNEEKHQTLRINLSPKLSPSIACTDCVACPSDRSQAKLSSNQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02742 209 Pfam Cytochrome oxidase complex assembly protein 1 79 145 IPR014807 -
Vifa5g02742 209 PANTHER CYTOCHROME OXIDASE COMPLEX ASSEMBLY PROTEIN 34 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02742 Vifa-Chr5 910891004 910893174 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02742 - - gmx:100813252 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02742 5 910891004 910893174 Vifa5g02742 5 910891004 910893174 ECH