Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02726 ATGCCGTACAAACCGTTTCTCTGCTTCTCCGTTCTCCTCGCGCTTCTCGCCGTTGCCGGAGGTGATTCCGGCGAAGCCGCCGAACTCGACTACTCCAAGCTCTCCGGTATTATAATCCCAGGCTTCGCGTCTACGCAGCTTCGAGCATGGTCTATTCTTGATTGTCCTTACTCTCCGCTCGATTTCAATCCTCTCGATTTGGTTTGGCTCGACACTACAAAACTTCTTTCTGCTGTGAATTGCTGGCTTAAGTGCATGTTGCTGGAGCCTTACAACCAGACAGATCATCCTGATTGTAAGTCACGTCCTGATAGCGGTCTTTCAGGGATTACTGAACTCGATCCAGGTTATATAACAGGTCCTCTTTCTTCTATATGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCGATAATTGCTGTTCCTTATGATTGGAGACTTTCACCGTCTATACTTGAAGAACGTGACCTTTACTTTCATAAGCTTAAATTGACATTTGAGACCGCTTACAAACTTCGAGGGGGCCCATCTTTAGTTTTTGCCCATTCATTGGGTAACAATGTTTTTCGTTATTTCTTAGAGTGGTTGAAGCTAGAAATTGCCCCAAAACATTATAACCAATGGCTGGATCAACATATTCATGCCTATTTTGCTGTTGGAGCCCCCCTTCTGGGTGCAACTGAAACCATTGAAGCAACCCTTTCTGGATTCACATTTGGTCTTCCAGTATCTGAGGTACCAGGGAACAGCTCGGTTAATGTTCAACTCCTTTTCTTCGTCATTGTGGATGATGCCTTTTTCCAAATAGTCAACATTGAAATTCCCTCAAGTCGTGGATTTGATGCATATCCAACGTTTTCAGAAATACCTGAGACCAACTTGTCCGGAATGGAATGTGGACTACCTATTCAATTATCTTTCTCAGCCCGTGAAATAGCGGATGGCTCCTTTTTCAAGGCAATTGAAGATTATGACCCAGACATCAAGAGGCTCTTATACCAGTTAGAGAAATCATACCTTGGTGATCCTGTTCTTAATCCACTTACACCTTGGGACCGACCACCGTTAAAAAATGTCTTCTGTATATATGGCAGTAATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGCGGCAAGCCGTACCCAGATAACTGGATCATTACAGATGTCGTTTATGAGTATGAAGGAACTCTGGTCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCTATAAGTGGTGATGAGACGGTTCCATACAACTCCCTTTCCTGGTGCAAAAACTGGCTGGGTCCAAAGGTGAACATCACAAGAGCTCCTCAGTCAGAGCACGATGGCTCAGATGTACAGATTGATTTGAATGTGGAACATCACTATGGAGAAGATATTGTTCCAAACATGACTAGATTTCCTAGGGTTAAGTACATAACTTATTATGAAGATTCTGAAAGTCTTCCAGGAAAGAGGACCGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCATCAGTGTTAATGAGGGAATTATGGCTTGAGATGTGGCGTGATATCCATCCCGATGCAAGATCAGAGTTTGTCACTAAAGCTAAGCGTGGACCTCTAAGAAATGAGGACTGCTATTGGGATTACGGGAAAGCTCGCTGTGCATGGCCAGAGTATTGTGAATACAGATATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTTCAGCTGATTTGTTGTTGCACTATTTGTAA 1785 0.4336 MPYKPFLCFSVLLALLAVAGGDSGEAAELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMLLEPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSIWKEWIKWCIEFGIEANAIIAVPYDWRLSPSILEERDLYFHKLKLTFETAYKLRGGPSLVFAHSLGNNVFRYFLEWLKLEIAPKHYNQWLDQHIHAYFAVGAPLLGATETIEATLSGFTFGLPVSEVPGNSSVNVQLLFFVIVDDAFFQIVNIEIPSSRGFDAYPTFSEIPETNLSGMECGLPIQLSFSAREIADGSFFKAIEDYDPDIKRLLYQLEKSYLGDPVLNPLTPWDRPPLKNVFCIYGSNSKTKVGYYFAPSGKPYPDNWIITDVVYEYEGTLVSRSGNLVEGNPGAISGDETVPYNSLSWCKNWLGPKVNITRAPQSEHDGSDVQIDLNVEHHYGEDIVPNMTRFPRVKYITYYEDSESLPGKRTAVWELDKANHRNIVRSSVLMRELWLEMWRDIHPDARSEFVTKAKRGPLRNEDCYWDYGKARCAWPEYCEYRYVFGDVHLGQSCRLRYTSADLLLHYL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02726 594 Gene3D alpha/beta hydrolase 95 262 IPR029058 -
Vifa5g02726 594 Pfam Lecithin:cholesterol acyltransferase 66 464 IPR003386 GO:0006629|GO:0008374
Vifa5g02726 594 SUPERFAMILY alpha/beta-Hydrolases 124 431 IPR029058 -
Vifa5g02726 594 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 33 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02726 Vifa-Chr5 906734968 906744665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02726 9 594 Acyl Lipid Metabolism Gene Families AT1G04010 70.429 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02726 - - gmx:100806466 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02726 5 906734968 906744665 Vifa5g02726 5 906734968 906744665 ECH