Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02722 ATGGAGGACAAACAACAAGAACAAGCAGGTCCGTCTTCTCTCATCGACAAAACCAAACAACAAATCGCTGAAAAACCCTCTCATAATGCTAGTGAAGACGAAGAAGACGAAGAAGAGCTCACTGATCATATAAAAAACGGTTCATTTGTTCCTGGTCCTCTTCTTTCTCTCAAGGAACAGATCGAAAAGGACAAGGAAGATGAAAGCTTGAGGAGGTGGAAGGAGAAGCTGTTGGGTTGCTTGGAAAGTGATTTAGATGGTCAATTGGATCCTGAAGTGAAATTTCACTCCATTGGAATTCTCTCTGAGGATTTTGGTGAAATTGTTACTCCTTTACCAGTGGAAGAAAATCAGACCGGTCTAACGCTATTCACTCTAAGAGAGGGCTCTCGTTATCAGCTTAAGCTACAATTTAGTGTTATGCACAACCTTGTTTCTGGCTTGACTTACTCCAACACTGTCTGGAAAGGAGGGTTTCAAGTTGATCAGAGCAAAGGAATGTTGGGTACTTTTGCACCCCAAAAGGAGCCATATGTATATGCGTTGAAAGAAGACACCACTCCCTCCGGCGCACTTGCAAGAGGTGTTTACTCAGCAAAACTTAAGTTTGAAGATGATGACAAAAGGTGTCATATGGAACTCAAATATTTGTTCGAGATTAAAAAAAGCGGCTAG 675 0.4178 MEDKQQEQAGPSSLIDKTKQQIAEKPSHNASEDEEDEEELTDHIKNGSFVPGPLLSLKEQIEKDKEDESLRRWKEKLLGCLESDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVEENQTGLTLFTLREGSRYQLKLQFSVMHNLVSGLTYSNTVWKGGFQVDQSKGMLGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIKKSG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02722 224 PANTHER RHO GDP-DISSOCIATION INHIBITOR 29 223 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vifa5g02722 224 Gene3D Coagulation Factor XIII, subunit A, domain 1 48 223 IPR024792 -
Vifa5g02722 224 FunFam Rho GDP-dissociation inhibitor 1 47 224 - -
Vifa5g02722 224 SUPERFAMILY E set domains 36 223 IPR014756 -
Vifa5g02722 224 MobiDBLite consensus disorder prediction 1 51 - -
Vifa5g02722 224 Pfam RHO protein GDP dissociation inhibitor 35 222 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02722 Vifa-Chr5 905659742 905661670 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02722 K12462 - gmx:100810029 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02722 5 905659742 905661670 Vifa5g02722 5 905659742 905661670 ECH