Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02719 ATGGAAGATTGTCATCCTCTATTGAGAGGAGGTAGAAGAAAAGAGAAAGGTTATAGCCATGGATTATCAACCACTCACATGCATGTTTTGGCTTCCATTTGTGACACCCTTTTTCCTTCTATCCAATTCAACAATGAAAATCAACCACTCTCATCCTTTTACACAACTTCTGGTTCTCAATTCCCATTTCCTGATGAGGGTGCAGAGTTATTGATGTTGTTCAAGAGGAGTGTACCAGAAGCATTGCCTTTGGTGAAGTGGATTCTAAGGATTCTGTCATTCAGGTTAGGGACACTGTTGCTTTGTGGAACCTATTGCTTGCAATGGAAGTGGCCATTTGTTCTTAAATTCTCTGAGATTGCATTGGAAAAGAGACAAGAAATGCTAAAGAGTTGGTCGAATGCGAAATGTTGGTGGTTGCCTCTAAGGGATGTGTTTGTGTTGCTCAAACTTAGTTTCTTCTATACTTTGTTCTCAAGGACAGATGAAAATGGAAATAATCCAATGTGGAAGGCAATAGGGTACAAGGTGGACACCAGGGAAAAGTTGAAACCAAATAAAAGGCCTCTCCAAGAAGGACTAATAGAGACTACGCACGAAACTGATTCTACATTAATCCAATCTCTGAATGAAAAAGGCCTTGAAGTCACTGAAGACGAAGAAAAGAACTTGTACAAGATCAAATGTGATGTTGTCATTGTCGGTTCTGGTTGCGGTGGAGGAGTTGCGGCTGCAGTTCTTGCAAAGTCAGGTCATAAAGTGATCATCCTAGAGAAAGGAGAGTATTTTGTTTCTCAAGATTATTCTTCCCTGGAAAACTCATCGATGGGCGAGCTATACGAATCAGGTGGCATCATGCCAACAATTGACGGTAAAACGATGATCTTGGCTGGCTCAACAGTAGGTGGAGGTTCAGCTATAAACTGGGCTGCATGTGTAAGAACACCAGATTCTGTCATGAAGGAATGGTCTGAAAAATATAAATTACCACTTTTCGCTAGCTCCGATTATCGATCTGCTATGGATTCGGTATGCAAAAGGATAGGTGTCACAGATAAATGCAACAAGGAAAGCTTTCAAAATCAAGTTCTTCGAAAAGGGTGTGAGAGTATCGGTTTAAAAGTTGAGTCAGTTTCTGTGAATGCTTCAGCAGATCATTATTGCGGTTCATGCAATTACGGTTGTAGAACAGGAGATAAAAAGGGAACCGACTCTACTTGGTTGGTCGATGCTGTAGAAAACGGCGCAGTTATCCTCACTGGATGTAAAGCTGAGAAATTCATTCTGCAAGATGGAAAAAATGGAACAAAGAGAAAGAATTGCTCAGGAGTGACTGCTGCAGCAAGTTGGAAGACGGACTACGAAATCCAAACATCGGAAACAACCTTCATCTCCACCCTGTTCAATTTGTTTGGGGCTATTTCCCTGAAGACATGA 1437 0.4134 MEDCHPLLRGGRRKEKGYSHGLSTTHMHVLASICDTLFPSIQFNNENQPLSSFYTTSGSQFPFPDEGAELLMLFKRSVPEALPLVKWILRILSFRLGTLLLCGTYCLQWKWPFVLKFSEIALEKRQEMLKSWSNAKCWWLPLRDVFVLLKLSFFYTLFSRTDENGNNPMWKAIGYKVDTREKLKPNKRPLQEGLIETTHETDSTLIQSLNEKGLEVTEDEEKNLYKIKCDVVIVGSGCGGGVAAAVLAKSGHKVIILEKGEYFVSQDYSSLENSSMGELYESGGIMPTIDGKTMILAGSTVGGGSAINWAACVRTPDSVMKEWSEKYKLPLFASSDYRSAMDSVCKRIGVTDKCNKESFQNQVLRKGCESIGLKVESVSVNASADHYCGSCNYGCRTGDKKGTDSTWLVDAVENGAVILTGCKAEKFILQDGKNGTKRKNCSGVTAAASWKTDYEIQTSETTFISTLFNLFGAISLKT 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02719 478 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 18 463 - -
Vifa5g02719 478 Pfam GMC oxidoreductase 230 458 IPR000172 GO:0016614|GO:0050660
Vifa5g02719 478 SUPERFAMILY FAD/NAD(P)-binding domain 227 433 IPR036188 -
Vifa5g02719 478 Gene3D - 214 466 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02719 Vifa-Chr5 904876623 904878908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g02719 1 448 Acyl Lipid Metabolism Gene Families AT4G28570 53.996 1.17e-161 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02719 K17756 - gmx:100808951 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02719 5 904876623 904878908 Vifa5g02719 5 904876623 904878908 ECH