Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02713 ATGAACATCTTCACCAAGAAACCCACCGCCAAAGAGGCTCTTCGAGAGAGTAAACGGGAAATGACAAACGCTACTAGAGGTATAGAAAGGGAAATTGCATCATTACAATCGGAAGAAAAGAAATTAGTTGCTGAGATTAAGAGAACTGCTAAGACCGGAAACGAGGCAGCGACTAAAACTCTAGCTCGGCAGTTGATAAGGCTTAGGCAACAGATTGGTAATCTCCAGGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCATACGCAGGCAATGCATGCCAATTCTTCTGTTGCTGTTGGTATTCAAGGTGCTACCAAGGCAATGGCAGCTATGAATAAGCAAATGGAACCAGCTAAGCAAGCCAAAGTTATGCAGGAATTCCAGAAACAATCGGCACAGATGGATATGACTACTGAAATGATGTCAGATGTCATAGACGATGCCTTGGATGATGATGAAGCCGAAGAGGAGACTGAAGAGCTTACAAACCAGGTGCTTGATGAAATCGGTGTAGATGTTGCCTCACAGTTATCAGCAGCTCCCAAAGGGAGAGTCGCAAGAAAGAATACTGAAAATGTCGGCAGCTCGGGCATTGATGACCTTGAGAAACGTTTGGCAGCTCTAAGAAACCCGTAA 639 0.4507 MNIFTKKPTAKEALRESKREMTNATRGIEREIASLQSEEKKLVAEIKRTAKTGNEAATKTLARQLIRLRQQIGNLQGSRAQMRGIATHTQAMHANSSVAVGIQGATKAMAAMNKQMEPAKQAKVMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGVDVASQLSAAPKGRVARKNTENVGSSGIDDLEKRLAALRNP 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02713 212 Gene3D - 4 181 - -
Vifa5g02713 212 MobiDBLite consensus disorder prediction 1 26 - -
Vifa5g02713 212 MobiDBLite consensus disorder prediction 180 212 - -
Vifa5g02713 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 211 IPR005024 GO:0007034
Vifa5g02713 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Vifa5g02713 212 MobiDBLite consensus disorder prediction 9 26 - -
Vifa5g02713 212 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02713 Vifa-Chr5 904091004 904094144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02713 K12192 - gmx:100306343 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02713 5 904091004 904094144 Vifa5g02713 5 904091004 904094144 ECH