Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02698 ATGGGTTCTCTACCAGCATTTCCAAACGGTTACCCTCCGAAACAAACCCTAATTGACGAAACTACCCTCACCGATCTCTTCAAATCTCAGCAAAATCACCTCAACTTCTTCTTCAACCGCATCGACCATTCCCAAACCTTAGCCTTCACACGCACTCTCCTCAACACCTCCGGCACCGTCTTCTTCACCGGCGTCGGCAAATCCGGCTTCGTCGCGCACAAAATCTCTCAAACACTCGTCTCCCTCGGCATCCGATCTTCCTTTCTCTCCCCCGTCGATGCTCTGCACGGCGACATCGGAATCCTCACCGATCGCGATGTGCTCGTTCTGCTTAGCAAATCTGGTGCCACCGAGGAGCTTATTCGCCTTGTCCCTTGCGCTAGAGCGAAAGGTGTGCGTATTATCGCTGTGACGTCTGTTGAAGGGAACGCGCTTTCCGCGGTGTGTGATATGACTGTGCATTTGCCGTTGGAGAGAGAGCTTTGTCCGTTTAACCTTGCGCCGGTTACTTCTACGGCGATTCAGATGGTTTTTGGTGATACGGTGGCGATTGCGCTCATGGCTGCACGGAATCTTACTAAGGATGAGTATGCTGCTAATCATCCCGCCGGGAAAATCGGCAAGAGCCTCATCTTTAAGGTAAGAGATGTGATGAAGAAAGATGAGGAGCTTCCGATATGCAGGGAATCAGATTTGATTATGGATCAGCTTGTGGAGCTTACGAGTAAAGGATGTGGATGCCTTCTTGTTATTGATGATGATCGCCGTCTGATTGGGACATTTACTGATGGTGATCTGCGTCGTACCCTCAAAGCTAGCGGAGAAGGCATTTTCAAACTCACTGTAGGGAAAATGTGCAACAGGAATCCGAGAACTATTGGTCCAGATGCTATGGCAGTGGATGCCATGAAGAAGATGGAAGCCCCTCCATCACCAGTCCAATTTTTGCCTGTGATAGATGATGACAATATTGTGATTGGGATTGTCACGTTGCATGGTTTGGTTTCAGCTGGGTTGTGA 1020 0.4951 MGSLPAFPNGYPPKQTLIDETTLTDLFKSQQNHLNFFFNRIDHSQTLAFTRTLLNTSGTVFFTGVGKSGFVAHKISQTLVSLGIRSSFLSPVDALHGDIGILTDRDVLVLLSKSGATEELIRLVPCARAKGVRIIAVTSVEGNALSAVCDMTVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKDEYAANHPAGKIGKSLIFKVRDVMKKDEELPICRESDLIMDQLVELTSKGCGCLLVIDDDRRLIGTFTDGDLRRTLKASGEGIFKLTVGKMCNRNPRTIGPDAMAVDAMKKMEAPPSPVQFLPVIDDDNIVIGIVTLHGLVSAGL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02698 339 CDD CBS_pair_SIS_assoc 210 335 - -
Vifa5g02698 339 ProSiteProfiles CBS domain profile. 286 339 IPR000644 -
Vifa5g02698 339 ProSiteProfiles CBS domain profile. 218 280 IPR000644 -
Vifa5g02698 339 PANTHER - 13 339 - -
Vifa5g02698 339 Pfam SIS domain 54 184 IPR001347 GO:0097367|GO:1901135
Vifa5g02698 339 PIRSF KdsD_KpsF 11 339 IPR004800 GO:0005975|GO:0016853
Vifa5g02698 339 CDD SIS_Kpsf 58 185 IPR035474 -
Vifa5g02698 339 Gene3D - 209 337 IPR046342 -
Vifa5g02698 339 NCBIfam KpsF/GutQ family sugar-phosphate isomerase 58 329 IPR004800 GO:0005975|GO:0016853
Vifa5g02698 339 ProSiteProfiles SIS domain profile. 49 192 IPR001347 GO:0097367|GO:1901135
Vifa5g02698 339 Pfam CBS domain 282 337 IPR000644 -
Vifa5g02698 339 Pfam CBS domain 214 271 IPR000644 -
Vifa5g02698 339 Gene3D - 19 208 - -
Vifa5g02698 339 SMART cbs_1 223 271 IPR000644 -
Vifa5g02698 339 SMART cbs_1 289 339 IPR000644 -
Vifa5g02698 339 SUPERFAMILY SIS domain 25 338 IPR046348 GO:0097367|GO:1901135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02698 K06041 - gmx:100805755 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02698 5 899139649 899141700 Vifa5g02698 5 899139649 899141700 ECH