Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa5g02622 | ATGGCAACCATTATTGCTGGCACCTCAACATCTTCAATCATCCGCACAGGTCTTGTGCACAAGCAACCTTTTGGAGTCTCATTCCAGACCGTTATTGGATTGCCATTGCCATCAATGGCTAAGGTTGGAAGAGTGAGGTGTTCCATTGAAGGAAAGCCTGATGTGCAAGAAAGCAGCTCAAGCATAGGAATGGGAGCATCCTTGATAGCAGCTATCTCTGCTGCAACCTTGTCAAGCCCAGCAGCCATGGCTTTGGTAGATGAGAGAATGAGCACTGAAGGAACTGGACTTCCCTTTGGTCTTAGCAATAATCTTCTTGGTTGGATCTTGTTTGGTGTCTTCGGTCTTATTTGGGCTCTCTATTTTATCTATGCTTCCTCCCTTGACGAGGATGACGATTCTGGATTGTCTCTGTAA | 417 | 0.4604 | MATIIAGTSTSSIIRTGLVHKQPFGVSFQTVIGLPLPSMAKVGRVRCSIEGKPDVQESSSSIGMGASLIAAISAATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFIYASSLDEDDDSGLSL | 138 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa5g02622 | 138 | PANTHER | PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC | 1 | 138 | IPR009806 | GO:0009507|GO:0009523|GO:0015979 | |
| Vifa5g02622 | 138 | Pfam | Photosystem II reaction centre W protein (PsbW) | 1 | 138 | IPR009806 | GO:0009507|GO:0009523|GO:0015979 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa5g02622 | Vifa-Chr5 | 874183026 | 874183515 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa5g02622 | K02721 | - | cave:132166109 | 149.443 |